T
Tom Oinn
Researcher at European Bioinformatics Institute
Publications - 37
Citations - 6663
Tom Oinn is an academic researcher from European Bioinformatics Institute. The author has contributed to research in topics: Workflow & Web service. The author has an hindex of 24, co-authored 37 publications receiving 6508 citations.
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Journal ArticleDOI
Taverna: a tool for the composition and enactment of bioinformatics workflows
Tom Oinn,Matthew Addis,Justin Ferris,Darren Marvin,Martin Senger,Mark Greenwood,Tim Carver,Kevin Glover,Matthew Pocock,Anil Wipat,Peter Li +10 more
TL;DR: The Taverna project has developed a tool for the composition and enactment of bioinformatics workflows for the life sciences community that is written in a new language called Scufl, where by each step within a workflow represents one atomic task.
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The InterPro database, an integrated documentation resource for protein families, domains and functional sites
Rolf Apweiler,Teresa K. Attwood,Amos Marc Bairoch,Alex Bateman,Ewan Birney,Margaret Biswas,Philipp Bucher,Lorenzo Cerutti,Florence Corpet,Michael D. R. Croning,Richard Durbin,Laurent Falquet,Wolfgang Fleischmann,Jérôme Gouzy,Henning Hermjakob,Nicolas Hulo,Inge Jonassen,Daniel Kahn,Alexander Kanapin,Youla Karavidopoulou,Rodrigo Lopez,Beate Marx,Nicola Mulder,Tom Oinn,Marco Pagni,Florence Servant,Christian J. A. Sigrist,Evgeni M. Zdobnov +27 more
TL;DR: InterPro is an integrated documentation resource for protein families, domains and functional sites, which amalgamates the efforts of the PROSITE, PRINTS, Pfam and ProDom database projects.
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Taverna: a tool for building and running workflows of services
TL;DR: Taverna is an application that eases the use and integration of the growing number of molecular biology tools and databases available on the web, especially web services, to perform a range of different analyses, such as sequence analysis and genome annotation.
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Taverna: lessons in creating a workflow environment for the life sciences
Tom Oinn,R. Mark Greenwood,Matthew Addis,M. Nedim Alpdemir,Justin Ferris,Kevin Glover,Carole Goble,Antoon Goderis,Duncan Hull,Darren Marvin,Peter Li,Phillip Lord,Matthew Pocock,Martin Senger,Robert Stevens,Anil Wipat,Chris Wroe +16 more
TL;DR: The Taverna Workbench as discussed by the authors is a Grid environment for the composition and execution of workflows for the life sciences community, which is based on the myGrid project's workbench.
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The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro.
Evelyn Camon,Michele Magrane,Daniel Barrell,David Binns,Wolfgang Fleischmann,Paul J. Kersey,Nicola Mulder,Tom Oinn,John Maslen,Anthony J. Cox,Rolf Apweiler +10 more
TL;DR: GO vocabulary has been applied to the nonredundant proteome sets for all other completely sequenced organisms as well as to proteins from a wide range of organisms where the proteome is not yet complete.