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Book ChapterDOI

Corpus Callosum 2D Segmentation on Diffusion Tensor Imaging Using Growing Neural Gas Network

TLDR
An automatic CC segmentation approach on Diffusion Tensor imaging (DTI) using Growing Neural Gas (GNG) network, an unsupervised machine learning algorithm, on the fractional anisotropy map is proposed.
Abstract
The Corpus Callosum (CC) segmentation on Magnetic Resonance Images (MRI) is of utmost importance for the study of neurodegenerative diseases, since it is the largest white matter brain structure, interconnecting the two cerebral hemispheres. Operator-independent segmentation methods are desirable, even though such task is complex due to shape and intensity variation among subjects, especially on low resolution images such as Diffusion-MRI. This paper proposes an automatic CC segmentation approach on Diffusion Tensor imaging (DTI). The method uses Growing Neural Gas (GNG) network, an unsupervised machine learning algorithm, on the fractional anisotropy map. The proposed method obtained a Dice coefficient of 0.88 in experiments using DTI of fifty human subjects, while other segmentation approaches obtained Dice results below 0.73. Although the GNG network had five parameters to be set, it requires no user intervention and was the only method that successfully detected and segmented the CC on all experimented dataset.

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Citations
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Proceedings ArticleDOI

Opencc – an open Benchmark data set for Corpus Callosum Segmentation and Evaluation

TL;DR: The OpenCC dataset can be used for comparison and evaluation of newly developed CC segmentation algorithms and some baseline segmentation results are provided by using two latest deep learning segmentation approaches.
Proceedings ArticleDOI

Can incomplete silver standard labels improve performance of DTI-based volumetric segmentation of the corpus callosum?

TL;DR: In this article , the authors study the possibility of improving automated segmentation of the Corpus Callosum (CC) using silver standard annotations, limited to 5 or 7 central slices, experiments performed throughout this work were done to compare methods of pre-training and fine tuning in an attempt to translate silver standard knowledge to improved performance in 3D CC segmentation.
References
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Journal ArticleDOI

The self-organizing map

TL;DR: The self-organizing map, an architecture suggested for artificial neural networks, is explained by presenting simulation experiments and practical applications, and an algorithm which order responses spatially is reviewed, focusing on best matching cell selection and adaptation of the weight vectors.
Proceedings Article

A Growing Neural Gas Network Learns Topologies

TL;DR: An incremental network model is introduced which is able to learn the important topological relations in a given set of input vectors by means of a simple Hebb-like learning rule.
Journal ArticleDOI

Topology representing networks

TL;DR: This competitive Hebbian rule provides a novel approach to the problem of constructing topology preserving feature maps and representing intricately structured manifolds and makes this novel approach particularly useful in all applications where neighborhood relations have to be exploited or the shape and topology of submanifolds have to been take into account.
Journal ArticleDOI

Towards a neuroanatomy of autism: a systematic review and meta-analysis of structural magnetic resonance imaging studies.

TL;DR: Autism may result from abnormalities in specific brain regions and a global lack of integration due to brain enlargement, and some regions may show abnormal growth trajectories.
Journal ArticleDOI

DTI tractography based parcellation of white matter: Application to the mid-sagittal morphology of corpus callosum

TL;DR: In this paper, diffusion tensor imaging (DTI) and tract tracing technique were applied to incorporate cortical connectivity information to the morphological study of the corpus callosum (CC) at the mid-sagittal level.
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