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Distinguishment of Weak Interactions of Hydrogen Atoms Bound to Carbon Atoms: X-Ray Crystal Structural and Hirshfeld Surface Analyses of 2- Hydroxy-7-methoxy-3-(2,4,6-trimethylbenzoyl)naphthalene with the 2- Methoxylated Homologue

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In this paper , X-ray crystal and Hirshfeld surface analyses of 2-hydroxy-7methoxy-3-(2,4,6- trimethylbenzoyl)naphthalene and its 2-methoxylated homologue were performed.
Abstract
Abstract: X-ray crystal and Hirshfeld surface analyses of 2-hydroxy-7-methoxy-3-(2,4,6- trimethylbenzoyl)naphthalene and its 2-methoxylated homologue show quantitatively and visually distinct molecular contacts in crystals and minute differences in the weak intermolecular interactions. The title compound has a helical tubular packing, where molecules are piled in a two-folded head-to-tail fashion. The homologue has a tight zigzag molecular string lined up behind each other via nonclassical intermolecular hydrogen bonds between the carbonyl oxygen atom and the hydrogen atom of the naphthalene ring. The dnorm index obtained from the Hirshfeld surface analysis quantitatively demonstrates stronger molecular contacts in the homologue, an ethereal compound, than in the title compound, an alcohol, which is consistent with the higher melting temperature of the former than the latter. Stabilization through the significantly weak intermolecular nonclassical hydrogen bonding interactions in the homologue surpasses the stability imparted by the intramolecular C=O…H–O classical hydrogen bonds in the title compound. The classical hydrogen bond places the six-membered ring in the concave of the title molecule. The hydroxy group opposingly disturbs the molecular aggregation of the title compound, as demonstrated by the distorted H…H interactions covering the molecular surface, owing to the rigid molecular conformation. The position of effective interactions predominate over the strength of the classical/nonclassical hydrogen bonds in the two compounds.

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Weak interaction based interpretation of crystal packing characteristics of aromatic rings accumulating molecules: Hirshfeld surface analyses reinforced X-ray crystal study on 1,8-dibenzoyl-7-ethoxynaphthalen-2- ol and its 2-ethoxylated homologue

TL;DR: In this paper , the molecular vicinity characteristics in the crystal of two dibenzoylnaphthalene derivatives having intimately similar molecular formula with solely one substituent difference, 2-hydroxy group or 2-ethoxy one, were comparatively investigated in relation to the types of weak interactions with the aid of X-ray crystal structural study reinforced by Hirshfeld surface analyses and two-dimensional plotting of the normalised interatomic distance crossing the molecular surface.
References
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Journal ArticleDOI

A short history of SHELX

TL;DR: This paper could serve as a general literature citation when one or more of the open-source SH ELX programs (and the Bruker AXS version SHELXTL) are employed in the course of a crystal-structure determination.
Journal ArticleDOI

OLEX2: a complete structure solution, refinement and analysis program

TL;DR: OLEX2 seamlessly links all aspects of the structure solution, refinement and publication process and presents them in a single workflow-driven package, with the ultimate goal of producing an application which will be useful to both chemists and crystallographers.
Journal ArticleDOI

Hirshfeld surface analysis

TL;DR: In the last few years, the analysis of molecular crystal structures using tools based on Hirshfeld surfaces has rapidly gained in popularity as mentioned in this paper, which represents an attempt to venture beyond the current paradigm of nuclear distances and angles, crystal packing diagrams with molecules represented via various models, and to view molecules as organic wholes.
Journal ArticleDOI

Supramolecular Synthons in Crystal Engineering—A New Organic Synthesis

TL;DR: In this article, the authors show that crystal engineering is a new organic synthesis, and that rather than being only nominally relevant to organic chemistry, this subject is well within the mainstream, being surprisingly similar to traditional organic synthesis in concept.
Journal ArticleDOI

Characterization of c-h-o hydrogen-bonds on the basis of the charge-density

TL;DR: In this paper, a set of criteria are proposed based on the theory of "atoms in molecules" to establish hydrogen bonding, even for multiple interactions involving C-H-O hydrogen bonds.
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