Book ChapterDOI
Isolation and crystallization of bacterial porin.
R M Garavito,J P Rosenbusch +1 more
TLDR
Porin has proven to be rather useful for the optimization of conditions to crystallize membrane proteins as it is very stable over a wide range of conditions Crystallization experiments (at 20°) are successful also using several other detergents with a moderate to high carboxymethyl cellulose (CMC) initial problems with reproducibility of porin crystallization revealed that a high degree of purity of this protein is required, and that the removal of tightly bound lipoprotein and glycolipid is critical for success as mentioned in this paper.Abstract:
Publisher Summary This chapter describes isolation and crystallization of bacterial porin The unusual aspects of porin crystallization are consistent with the micellar interactions involved in crystal formation The resulting porin crystals are relatively sensitive to the environment Care must be taken in handling and mounting crystals for X-ray analysis to avoid significant or abrupt changes in the solvent or detergent environment and uncontrolled variations of temperature Porin has proven to be rather useful for the optimization of conditions to crystallize membrane proteins as it is very stable over a wide range of conditions Crystallization experiments (at 20°) are successful also using several other detergents with a moderate to high carboxymethyl cellulose (CMC) Initial problems with reproducibility of porin crystallization revealed that a high degree of purity of this protein is required, and that the removal of tightly bound lipoprotein and glycolipid is critical for success Although current experience is limited, it seems fair to conclude that with a better understanding of protein–amphiphile interactions, of micellar physical chemistry, and with improvement in crystallization techniques, the outlook for understanding membrane protein structure appears brightread more
Citations
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Journal ArticleDOI
Detergents as Tools in Membrane Biochemistry
TL;DR: The various aggregate forms detergents assume and some misconceptions about their structure are discussed in this minireview.
Journal ArticleDOI
Amphipols: Polymers that keep membrane proteins soluble in aqueous solutions
TL;DR: Amphipols are a new class of surfactants that make it possible to handle membrane proteins in detergent-free aqueous solution as though they were soluble proteins.
Journal ArticleDOI
Membrane protein crystallization.
TL;DR: The cubic-phase method is described from the following perspectives: how it is done in practice, its general applicability and successes to date, and the nature of the mesophases integral to the process.
Journal ArticleDOI
Models for the structure of outer-membrane proteins of Escherichia coli derived from Raman spectroscopy and prediction methods
Horst Vogel,Fritz Jähnig +1 more
TL;DR: Folding models are developed for porin and for the segment of OmpA protein incorporated into the membrane that consists of eight amphipathic membrane-spanning beta-strands that form a beta-barrel.
Journal ArticleDOI
Crystal structure of osmoporin OmpC from E. coli at 2.0 A
TL;DR: The OmpC structure suggests that not pore size, but electrostatic pore potential and particular atomic details of the pore linings are the critical parameters that physiologically distinguish Omp C from OmpF.
References
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Journal ArticleDOI
X-ray structure analysis of a membrane protein complex. Electron density map at 3 Å resolution and a model of the chromophores of the photosynthetic reaction center from Rhodopseudomonas viridis
TL;DR: In this paper, an atomic model of the prosthetic groups of the reaction center complex (4 bacteriochlorophyll b, 2 bacteriopheophytin b, 1 non-heme iron, 1 menaquinone, 4 heme groups) was built.
Book
Preparation and analysis of protein crystals
TL;DR: A complete guide to techniques and procedures for the preparation of proteins for crystallographic studies is given in this article, which describes methods for protein crystallization; formation of isomorphous heavy atoms; x-ray diffraction and analysis; and photographic and computer-based data collection methods and instrumentation.
Journal ArticleDOI
Characterization of the Major Envelope Protein from Escherichia coli REGULAR ARRANGEMENT ON THE PEPTIDOGLYCAN AND UNUSUAL DODECYL SULFATE BINDING
TL;DR: The major envelope protein from Escherichia coli has been purified by differential heat extraction in dodecyl sulfate and subsequently freed of the detergent, and its molecular weight agrees with that derived from the mobility of the major band observed in standard dodecYL sulfate gel electrophoretic analysis of unfractionated cell envelopes after treatment at 100°.
Journal ArticleDOI
Three-dimensional crystals of a membrane protein complex: The photosynthetic reaction centre from Rhodopseudomonas viridis
TL;DR: Reaction centres of photosynthesis isolated from the photosynthetic bacterium Rhodopseudomonas viridis by a single step of molecular sieve chromatography were crystallized.
Journal ArticleDOI
Three-dimensional crystals of an integral membrane protein: an initial x-ray analysis.
R M Garavito,J P Rosenbusch +1 more
TL;DR: Matrix protein, a pore-forming transmembrane protein spanning the outer membrane of Escherichia coli, has been obtained in a variety of three- dimensional crystal forms amenable to both electron microscope and x- ray analyses.