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Journal ArticleDOI

Statistically validated QSARs, based on theoretical descriptors, for modeling aquatic toxicity of organic chemicals in Pimephales promelas (fathead minnow).

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TLDR
Different molecular descriptors in the development of new statistically validated QSAR models to predict the aquatic toxicity of chemicals classified according to their MOA and in a unique general model are compared.
Abstract
The use of Quantitative Structure-Activity Relationships in assessing the potential negative effects of chemicals plays an important role in ecotoxicology. (LC50)(96h) in Pimephales promelas (Duluth database) is widely modeled as an aquatic toxicity end-point. The object of this study was to compare different molecular descriptors in the development of new statistically validated QSAR models to predict the aquatic toxicity of chemicals classified according to their MOA and in a unique general model. The applied multiple linear regression approach (ordinary least squares) is based on theoretical molecular descriptor variety (1D, 2D, and 3D, from DRAGON package, and some calculated logP). The best combination of modeling descriptors was selected by the Genetic Algorithm-Variable Subset Selection procedure. The robustness and the predictive performance of the proposed models was verified using both internal (cross-validation by LOO, bootstrap, Y-scrambling) and external statistical validations (by splitting the original data set into training and validation sets by Kohonen-artificial neural networks (K-ANN)). The model applicability domain (AD) was checked by the leverage approach to verify prediction reliability.

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Journal ArticleDOI

Principles of QSAR models validation: internal and external

TL;DR: Evidence is presented that only models that have been validated externally, after their internal validation, can be considered reliable and applicable for both external prediction and regulatory purposes.
Journal ArticleDOI

How not to develop a quantitative structure–activity or structure–property relationship (QSAR/QSPR)

TL;DR: 21 types of error that continue to be perpetrated in the QSAR/QSPR literature are identified and each is discussed, with examples (including some of the authors' own).
Journal ArticleDOI

QSARINS-chem: Insubria datasets and new QSAR/QSPR models for environmental pollutants in QSARINS.

TL;DR: A database of environmentally hazardous chemicals, collected and modeled by QSar by the Insubria group, is included in the updated version of QSARINS, software recently proposed for the development and validation ofQSAR models by the genetic algorithm‐ordinary least squares method.
Journal ArticleDOI

Can we estimate the accuracy of ADME-Tox predictions?

TL;DR: An analysis of octanol-water distribution coefficients is used to exemplify the consistency of estimated and calculated accuracy of the ALOGPS program (http://www.vcclab.org) to predict in-house and publicly available datasets.
Book

Molecular, Clinical and Environmental Toxicology

Andreas Luch
TL;DR: Molecular, clinical, and environmental toxicolog , Molecular, clinical and environmental Toxicolog, Clinical, andEnvironmental toxicolog, کتابخانه دیجیتال جندی اهواز
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