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Journal ArticleDOI

Underlying molecular interaction of bovine serum albumin and linezolid: a biophysical outlook

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TLDR
It is concluded that linezolid interacts with BSA in 1:1 ratio through hydrophobic, hydrogen bonding and ionic interactions, and this may not affect the secondary structure of the protein.
Abstract
Linezolid, one of the reserve antibiotic of oxazolidinone class has wide range of antimicrobial activity. Here we have conducted a fundamental study concerning the dynamics of its interaction with bovine serum albumin (BSA), and the post binding modification of the later by employing different spectroscopic (absorption, fluorescence and circular dichroism (CD) spectroscopy) and molecular docking tools. Gradual quenching of the tryptophan (Trp) fluorescence upon addition of linezolid to BSA confirms their interaction. Analysis of fluorescence quenching at different temperature indicates that the interaction is made by static complex formation and the BSA has one binding site for the drug. The negative Gibbs energy change (ΔG0), and positive values of enthalpy change (ΔH0) and entropy change (ΔS0) strongly suggest that it is an entropy driven spontaneous and endothermic reaction. The reaction involves hydrophobic pocket of the protein, which is further stabilized by hydrogen bonding and electrostatic intera...

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Citations
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Journal ArticleDOI

Evaluation of the binding behavior of olmutinib (HM61713) with model transport protein: Insights from spectroscopic and molecular docking studies

TL;DR: Olmutinib (HM61713, OMT), a novel third-generation tyrosine kinase inhibitor with good orally absorption, is able to inhibit selectively epidermal growth factor receptor mutations and can provide valuable reference for designing new anti-tumor drugs.
Journal ArticleDOI

Characterizing the interaction between pyrogallol and human serum albumin by spectroscopic and molecular docking methods

TL;DR: The interaction of Pyrogallol with human serum albumin (HSA) was investigated by UV, fluorescence, Circular dichroism, and molecular docking methods and indicated that PG induced conformational changes in the structure of HSA.
Journal ArticleDOI

Multispectroscopic insight, morphological analysis and molecular docking studies of CuII-based chemotherapeutic drug entity with human serum albumin (HSA) and bovine serum albumin (BSA).

TL;DR: The collaborative results of spectroscopic studies indicated that the microenvironment and the conformation of HSA and BSA were significantly perturbed upon interaction with complex [C36H50N8O6Cu].
Journal ArticleDOI

In vitro cytotoxicity and DNA/HSA interaction study of triamterene using molecular modelling and multi-spectroscopic methods.

TL;DR: In vitro cytotoxicity of triamterene against HCT116 and CT26 cells showed promising anticancer effects and viscosity data confirmed that triamTerene binds to calf–thymus DNA through intercalation binding mode.
Journal ArticleDOI

Nonionic but water soluble, [Glycine-Pd-Alanine] and [Glycine-Pd-Valine] complexes. Their synthesis, characterization, antitumor activities and rich DNA/HSA interaction studies.

TL;DR: It is suggested that both of the Pd(II) complexes exhibit the groove binding mode with CT-DNA and interact with the main binding pocket of HSA and play a major role in the binding of the complexes to DNA and HSA.
References
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Book

Principles of fluorescence spectroscopy

TL;DR: This book describes the fundamental aspects of fluorescence, the biochemical applications of this methodology, and the instrumentation used in fluorescence spectroscopy.
Journal ArticleDOI

Thermodynamics of protein association reactions: forces contributing to stability

Philip D. Ross, +1 more
- 26 May 1981 - 
TL;DR: On the basis of the thermochemical behavior of small molecule interactions, it is concluded that the strengthening of hydrogen bonds in the past decade, a complete thermodynamic description of the self-association of many proteins and their interactions is concluded.
Journal ArticleDOI

Iterative partial equalization of orbital electronegativity – a rapid access to atomic charges

TL;DR: In this article, a method for the rapid calculation of atomic charges in σ-bonded and nonconjugated π-systems is presented, where only the connectivities of the atoms are considered.
Journal ArticleDOI

Quenching of fluorescence by oxygen. A probe for structural fluctuations in macromolecules.

Joseph R. Lakowicz, +1 more
- 09 Oct 1973 - 
TL;DR: In this article, the fluorescence of various fluorophores by molecular oxygen has been studied in aqueous and nonaqueous solutions equilibrated with oxygen pressures up to 100 atm.
Journal ArticleDOI

Solute perturbation of protein fluorescence. The quenching of the tryptophyl fluorescence of model compounds and of lysozyme by iodide ion.

Sherwin S. Lehrer
- 17 Aug 1971 - 
TL;DR: The results of the model compound study provide evidence for a mechanism that follows the classical Stern-Volmer law (1919), predominantly involving collisional quenching, and illustrate the importance of local charge and solvent viscosity.
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