A
Amelia F. Alessi
Researcher at Johns Hopkins University
Publications - 9
Citations - 410
Amelia F. Alessi is an academic researcher from Johns Hopkins University. The author has contributed to research in topics: Cell fate determination & Caenorhabditis elegans. The author has an hindex of 6, co-authored 8 publications receiving 274 citations. Previous affiliations of Amelia F. Alessi include University of Michigan.
Papers
More filters
Journal ArticleDOI
Glycolytic Enzymes Coalesce in G Bodies under Hypoxic Stress.
Meiyan Jin,Gregory G Fuller,Ting Han,Yao Yao,Amelia F. Alessi,Amelia F. Alessi,Mallory A. Freeberg,Mallory A. Freeberg,Nathan P. Roach,James J. Moresco,Alla Karnovsky,Misuzu Baba,John R. Yates,Aaron D. Gitler,Ken Inoki,Daniel J. Klionsky,John Kim,John Kim +17 more
TL;DR: G body formation is a conserved, adaptive response to increase glycolytic output during hypoxia or tumorigenesis, and it is suggested that G bodies form in human hepatocarcinoma cells inhypoxia.
Journal ArticleDOI
The Caenorhabditis elegans HEN1 Ortholog, HENN-1, Methylates and Stabilizes Select Subclasses of Germline Small RNAs
Allison C. Billi,Amelia F. Alessi,Vishal Khivansara,Ting Han,Mallory A. Freeberg,Shohei Mitani,John Kim +6 more
TL;DR: The worm HEN1 ortholog, HENN-1 (HEN of Nematode), is required for methylation of piRNAs and some endogenous and exogenous small interfering RNAs, and these findings support a model wherein methylation status of a metazoan small RNA is dictated by the Argonaute to which it binds.
Journal ArticleDOI
FUS Regulates Activity of MicroRNA-Mediated Gene Silencing
Tao Zhang,Yen Ching Wu,Patrick C. Mullane,Yon Ju Ji,Hong-he Liu,Lu He,Amit Arora,Ho Yon Hwang,Amelia F. Alessi,Amirhossein Ghanbari Niaki,Goran Periz,Lin Guo,Hejia Wang,Elad Elkayam,Leemor Joshua-Tor,Sua Myong,John Kim,James Shorter,Shao En Ong,Anthony K.L. Leung,Jiou Wang +20 more
TL;DR: F fused in sarcoma (FUS), an RNA-binding protein linked to neurodegenerative diseases including amyotrophic lateral sclerosis (ALS), interacts with the core miRISC component AGO2 and is required for optimal microRNA-mediated gene silencing.
Journal ArticleDOI
The full-length transcriptome of C. elegans using direct RNA sequencing.
TL;DR: N nanopore-based direct RNA sequencing is applied to characterize the developmental polyadenylated transcriptome of C. elegans, providing support for 23,865 splice isoforms across 14,611 genes, without the need for computational reconstruction of gene models and determining that poly(A) tail lengths of transcripts vary across development, as do the strengths of previously reported correlations between poly( A) tail length and expression level.
Posted ContentDOI
The full-length transcriptome of C. elegans using direct RNA sequencing
TL;DR: N nanopore-based direct RNA sequencing is applied to characterize the developmental polyadenylated transcriptome of C. elegans, providing support for 20,902 splice isoforms across 14,115 genes, without the need for computational reconstruction of gene models and determining that poly(A) tail lengths of transcripts vary across development, as do the strengths of previously reported correlations between poly( A) tail length and expression level.