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Amelia Peterson
Researcher at Thermo Fisher Scientific
Publications - 19
Citations - 9119
Amelia Peterson is an academic researcher from Thermo Fisher Scientific. The author has contributed to research in topics: Mass spectrometry & Orbitrap. The author has an hindex of 15, co-authored 19 publications receiving 8262 citations. Previous affiliations of Amelia Peterson include Institute for Systems Biology & Fred Hutchinson Cancer Research Center.
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Journal ArticleDOI
Circulating microRNAs as stable blood-based markers for cancer detection
Patrick S. Mitchell,Rachael K. Parkin,Evan M. Kroh,Brian R. Fritz,Brian R. Fritz,Stacia K. Wyman,Era L. Pogosova-Agadjanyan,Amelia Peterson,Jennifer Noteboom,Kathy O'Briant,April Allen,Daniel W. Lin,Daniel W. Lin,Daniel W. Lin,Nicole Urban,Charles W. Drescher,Beatrice S. Knudsen,Derek L. Stirewalt,Robert Gentleman,Robert L. Vessella,Robert L. Vessella,Peter S. Nelson,Daniel Martin,Daniel Martin,Muneesh Tewari +24 more
TL;DR: It is shown here that miRNAs are present in human plasma in a remarkably stable form that is protected from endogenous RNase activity and established the measurement of tumor-derived mi RNAs in serum or plasma as an important approach for the blood-based detection of human cancer.
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Parallel Reaction Monitoring for High Resolution and High Mass Accuracy Quantitative, Targeted Proteomics
TL;DR: This work proposes a new targeted proteomics paradigm centered on the use of next generation, quadrupole-equipped high resolution and accurate mass instruments: parallel reaction monitoring (PRM), and suggests that PRM will be a promising new addition to the quantitative proteomics toolbox.
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The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools.
John Klimek,James S. Eddes,Laura Hohmann,Jennifer Jackson,Amelia Peterson,Simon Letarte,Philip R. Gafken,Jonathan E. Katz,Parag Mallick,Hookeun Lee,Alexander Schmidt,Reto Ossola,Jimmy K. Eng,Ruedi Aebersold,Daniel Martin +14 more
TL;DR: This work sought to generate a data set of reference data covering multiple instrumentation platforms to facilitate both the refinement of existing computational approaches and the development of novel software tools.
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Prevalence of transcription promoters within archaeal operons and coding sequences
Tie Koide,David J Reiss,J. Christopher Bare,Wyming Lee Pang,Marc T. Facciotti,Marc T. Facciotti,Amy K. Schmid,Min Pan,Bruz Marzolf,Phu T. Van,Fang Yin Lo,Abhishek Pratap,Eric W. Deutsch,Amelia Peterson,Daniel Martin,Daniel Martin,Nitin S. Baliga,Nitin S. Baliga +17 more
TL;DR: Using experimental validation, the prevalence of overlapping genomic signals in archaeal transcription is illustrated, casting doubt on the general perception of rigid boundaries between coding sequences and regulatory elements.
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MRMer, an interactive open source and cross-platform system for data extraction and visualization of multiple reaction monitoring experiments
Daniel Martin,Ted Holzman,Damon May,Amelia Peterson,Ashley Eastham,Jimmy K. Eng,Jimmy K. Eng,Martin W. McIntosh +7 more
TL;DR: An interactive software platform, called MRMer, is developed, for managing highly complex MRM-MS experiments, including quantitative analyses using heavy/light isotopic peptide pairs, and incorporates features that permit the quantitative analysis experiments including heavy and light isotopic Peptide pairs.