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Bahram G. Kermani
Publications - 5
Citations - 596
Bahram G. Kermani is an academic researcher. The author has contributed to research in topics: Germline & Fusion gene. The author has an hindex of 4, co-authored 5 publications receiving 500 citations.
Papers
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Journal ArticleDOI
Analytical and clinical validation of a digital sequencing panel for quantitative, highly accurate evaluation of cell-free circulating tumor DNA
Richard B. Lanman,Stefanie Mortimer,Oliver A. Zill,Dragan Sebisanovic,Rene Lopez,Sibel Blau,Eric A. Collisson,Stephen G. Divers,Dave S.B. Hoon,E. Scott Kopetz,Jeeyun Lee,Petros Nikolinakos,Arthur Baca,Bahram G. Kermani,Helmy Eltoukhy,Amir Ali Talasaz +15 more
TL;DR: The analytic and clinical validation of the gene panel are reported and near-perfect analytic specificity enables complete coverage of many genes without the false positives typically seen with traditional sequencing assays at mutant allele frequencies or fractions below 5%.
Patent
Detection and treatment of disease exhibiting disease cell heterogeneity and systems and methods for communicating test results
TL;DR: In this article, a set of methods for generating and applying therapeutic interventions for cancer cells from a subject are described. But none of the methods are suitable for the analysis of tumor heterogeneity.
Patent
Identification of somatic mutations versus germline variants for cell-free dna variant calling applications
Bahram G. Kermani,Helmy Eltoukhy +1 more
TL;DR: In this article, the authors present systems and methods to detect somatic or germline variants by providing a predetermined genomic DNA (gDNA) to an assay mixture, and capturing a sample of a subject's genetic information using a DNA sequencer and detecting genetic variants from the genetic information.
Patent
Methods and applications of gene fusion detection in cell-free dna analysis
TL;DR: In this paper, a set of methods are described for determining gene fusion by determining a fused read containing sequencing data of a portion of a fused chromosome DNA molecule, determining a predetermined point on the genome with at least one mapped portion of the fused read clipped at the predetermined point (a breakpoint), identifying two mapped read portions from two breakpoints (breakpoint pair) as a potential fusion candidate, creating one or more fusion sets based on breakpoint pairs and clustering the fusion sets into one or multiple fusion clusters, and identifying each fusion cluster meeting a predetermined criterion as a gene
Proceedings ArticleDOI
Abstract 2403: Biopsy-free comprehensive tumor profiling of 1,000+ consecutive cancer patients using CLIA-certified commercial test and its clinical utility
Eric A. Collisson,Stefanie Mortimer,Dragan Sebisanovic,Reza Bayat Mokhtari,Somayeh Bakhtiari,Rene Lopez,Devi M. Gadde,Maria M. Vidamo,Heena Patel,Bahram G. Kermani,Helmy Eltoukhy,Richard B. Lanman,AmirAli Talasaz +12 more
TL;DR: Comprehensive sequencing of a patient9s cancer in real -time through a simple blood test can empower oncologists to make better informed treatment decisions, especially when repeat tissue biopsy is not a desirable or viable option.