E
Elmar Krieger
Researcher at Radboud University Nijmegen Medical Centre
Publications - 44
Citations - 11719
Elmar Krieger is an academic researcher from Radboud University Nijmegen Medical Centre. The author has contributed to research in topics: Binding site & Mutation. The author has an hindex of 33, co-authored 44 publications receiving 10140 citations. Previous affiliations of Elmar Krieger include Radboud University Nijmegen.
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Journal ArticleDOI
Mutations in the DJ-1 Gene Associated with Autosomal Recessive Early-Onset Parkinsonism
Vincenzo Bonifati,Vincenzo Bonifati,Patrizia Rizzu,Marijke J. van Baren,Onno Schaap,Guido J. Breedveld,Elmar Krieger,Marieke C. J. Dekker,Ferdinando Squitieri,Pablo Ibanez,Marijke Joosse,Jeroen W.F. van Dongen,Nicola Vanacore,Nicola Vanacore,John C. van Swieten,Alexis Brice,Giuseppe Meco,Cornelia M. van Duijn,Ben A. Oostra,Peter Heutink +19 more
TL;DR: It is shown that DJ-1 mutations are associated with PARK7, a monogenic form of human parkinsonism, and these findings indicate that loss ofDJ-1 function leads to neurodegeneration.
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Increasing the precision of comparative models with YASARA NOVA--a self-parameterizing force field.
TL;DR: An all‐atom force field aimed at protein and nucleotide optimization in vacuo (NOVA), which has been specifically designed to avoid this problem and can be applied to modeling applications as well as X‐ray and NMR structure refinement.
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Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: Four approaches that performed well in CASP8.
Elmar Krieger,Keehyoung Joo,Jinwoo Lee,Jooyoung Lee,Srivatsan Raman,James Thompson,Michael D. Tyka,David Baker,Kevin Karplus +8 more
TL;DR: In this article, the authors describe four approaches that address the last mile of the protein folding problem and have performed well during CASP8, yielding physically realistic models: YASARA, which runs molecular dynamics simulations of models in explicit solvent, using a new partly knowledge-based all atom force field derived from Amber.
Journal ArticleDOI
YASARA View—molecular graphics for all devices—from smartphones to workstations
Elmar Krieger,Gert Vriend +1 more
TL;DR: A new approach to solve the ‘molecular graphics problem’ is described, which shares the work between GPU and multiple CPU cores, generates high-quality results with perfectly round spheres, shadows and ambient lighting and requires only OpenGL 1.0 functionality.
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A series of PDB related databases for everyday needs.
Robbie P. Joosten,Tim A. H. te Beek,Elmar Krieger,Maarten L. Hekkelman,Rob Hooft,Reinhard Schneider,Chris Sander,Gert Vriend +7 more
TL;DR: A series of databases that run parallel to the Protein Data Bank, used for the analysis of properties of protein structures in areas ranging from structural genomics, to cancer biology and protein design, are presented.