F
Felix Bemm
Researcher at Max Planck Society
Publications - 33
Citations - 2857
Felix Bemm is an academic researcher from Max Planck Society. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 17, co-authored 32 publications receiving 2079 citations. Previous affiliations of Felix Bemm include University of Würzburg.
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Journal ArticleDOI
1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana
Carlos Alonso-Blanco,Jorge Andrade,Claude Becker,Felix Bemm,Joy Bergelson,Karsten M. Borgwardt,Jun Cao,Eunyoung Chae,Todd M. Dezwaan,Wei Ding,Joseph R. Ecker,Moises Exposito-Alonso,Ashley Farlow,Joffrey Fitz,Xiangchao Gan,Dominik G. Grimm,Angela M. Hancock,Stefan R. Henz,Svante Holm,Matthew W. Horton,Mike Jarsulic,Randall A. Kerstetter,Arthur Korte,Pamela Korte,Christa Lanz,Cheng-Ruei Lee,Dazhe Meng,Todd P. Michael,Richard Mott,Ni Wayan Muliyati,Thomas Nägele,Matthias Nagler,Viktoria Nizhynska,Magnus Nordborg,Polina Yu. Novikova,F. Xavier Picó,Alexander Platzer,Fernando A. Rabanal,Alex Rodriguez,Beth A. Rowan,Patrice A. Salomé,Karl Schmid,Robert J. Schmitz,Ümit Seren,Felice Gianluca Sperone,Mitchell Sudkamp,Hannes Svardal,Matt M. Tanzer,Donald Todd,Samuel L. Volchenboum,Congmao Wang,George Wang,Xi Wang,Wolfram Weckwerth,Detlef Weigel,Xuefeng Zhou +55 more
TL;DR: Insights into the history of the species and the fine-scale distribution of genetic diversity provide the basis for full exploitation of A. thaliana natural variation through integration of genomes and epigenomes with molecular and non-molecular phenotypes.
Journal ArticleDOI
Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions
Taiji Kawakatsu,Shao-shan Carol Huang,Florian Jupe,Eriko Sasaki,Robert J. Schmitz,Robert J. Schmitz,Mark A. Urich,Rosa Castanon,Joseph R. Nery,Cesar Barragan,Yupeng He,Huaming Chen,Manu J. Dubin,Cheng-Ruei Lee,Congmao Wang,Felix Bemm,Claude Becker,Ryan C. O’Neil,Ronan C. O'Malley,Danjuma Quarless,Nicholas J. Schork,Detlef Weigel,Magnus Nordborg,Joseph R. Ecker,Joseph R. Ecker +24 more
TL;DR: Comparison to cistrome and epicistrome datasets identifies associations between transcription factor binding sites, methylation, nucleotide variation, and co-expression modules in the 1001 Genomes collection of Arabidopsis thaliana.
Journal ArticleDOI
High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell.
Todd P. Michael,Florian Jupe,Florian Jupe,Felix Bemm,Stanley Motley,Justin P. Sandoval,Christa Lanz,Olivier Loudet,Detlef Weigel,Joseph R. Ecker +9 more
TL;DR: It is demonstrated that even when the purpose is to understand complex structural variation at a single region of the genome, complete genome assembly is becoming the simplest way to achieve this goal.
Journal ArticleDOI
A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana.
Anna-Lena Van de Weyer,Freddy Monteiro,Freddy Monteiro,Freddy Monteiro,Oliver J. Furzer,Oliver J. Furzer,Oliver J. Furzer,Marc T. Nishimura,Volkan Cevik,Volkan Cevik,Kamil Witek,Jonathan D. G. Jones,Jeffery L. Dangl,Detlef Weigel,Felix Bemm +14 more
TL;DR: This study defines a nearly complete species-wide pan-NLRome in Arabidopsis thaliana based on sequence enrichment and long-read sequencing, and charts NLR architectural diversity, identify new architectures, and quantify selective forces that act on specific NLRs and NLR domains.
Journal ArticleDOI
Different but overlapping populations of Strongyloides stercoralis in dogs and humans-Dogs as a possible source for zoonotic strongyloidiasis.
Tegegn G. Jaleta,Tegegn G. Jaleta,Siyu Zhou,Felix Bemm,Fabian Schär,Fabian Schär,Virak Khieu,Sinuon Muth,Peter Odermatt,Peter Odermatt,James B. Lok,Adrian Streit +11 more
TL;DR: In dogs, the results show that dogs carry two populations, possibly different species of Strongyloides, which argues for the strong potential of dogs as reservoirs for zoonotic transmission of S. stercoralis to humans and suggests that in order to reduce the exposure of humans to infective S.Stercorais larvae, dogs should be treated for the infection along with their owners.