G
Gerhard G. Thallinger
Researcher at Graz University of Technology
Publications - 118
Citations - 21472
Gerhard G. Thallinger is an academic researcher from Graz University of Technology. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 34, co-authored 109 publications receiving 18304 citations. Previous affiliations of Gerhard G. Thallinger include University of Graz & University of Natural Resources and Life Sciences, Vienna.
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Journal ArticleDOI
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss,Patrick D. Schloss,Sarah L. Westcott,Sarah L. Westcott,Thomas Ryabin,Justine R. Hall,Martin Hartmann,Emily B. Hollister,Ryan A. Lesniewski,Brian B. Oakley,Donovan H. Parks,Courtney J. Robinson,Jason W. Sahl,Blaz Stres,Gerhard G. Thallinger,David J. Van Horn,Carolyn F. Weber +16 more
TL;DR: M mothur is used as a case study to trim, screen, and align sequences; calculate distances; assign sequences to operational taxonomic units; and describe the α and β diversity of eight marine samples previously characterized by pyrosequencing of 16S rRNA gene fragments.
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Dimension reduction techniques for the integrative analysis of multi-omics data
Chen Meng,Oana A. Zeleznik,Gerhard G. Thallinger,Bernhard Kuster,Amin Moghaddas Gholami,Aedín C. Culhane +5 more
TL;DR: This work explores dimension reduction techniques as one of the emerging approaches for data integration, and how these can be applied to increase the understanding of biological systems in normal physiological function and disease.
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Inferring expressed genes by whole-genome sequencing of plasma DNA
Peter Ulz,Gerhard G. Thallinger,Martina Auer,Ricarda Graf,Karl Kashofer,Stephan W Jahn,Luca Abete,Gunda Pristauz,Edgar Petru,Jochen B. Geigl,Ellen Heitzer,Michael R. Speicher +11 more
TL;DR: It is found that the plasma DNA read depth patterns from healthy donors reflected the expression signature of hematopoietic cells, and in patients with cancer having metastatic disease, expressed cancer driver genes in regions with somatic copy number gains with high accuracy were classified.
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Lipid Data Analyzer
Jürgen Hartler,Martin Trötzmüller,Chandramohan Chitraju,Friedrich Spener,Harald Köfeler,Gerhard G. Thallinger +5 more
TL;DR: Thallinger et al. as discussed by the authors presented a novel approach for quantification of lipids in LC-MS data, which obtains its analytical power by two major innovations: (i) a 3D algorithm that confines the peak borders in m/z and time direction and (ii) the use of the theoretical isotopic distribution of an analyte as selection/exclusion criterion.
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High-quality genome sequence of Pichia pastoris CBS7435
Andreas Küberl,Jessica Schneider,Gerhard G. Thallinger,Ingund Anderl,Daniel Wibberg,Tanja Hajek,Sebastian Jaenicke,Karina Brinkrolf,Alexander Goesmann,Rafael Szczepanowski,Alfred Pühler,Helmut Schwab,Anton Glieder,Harald Pichler +13 more
TL;DR: The complete DNA sequence of the first mitochondrial genome of a methylotrophic yeast is reported, and the architecture of the putative alpha mating factor protein of P. pastoris CBS7435 turned out to be more complex than the corresponding protein of Saccharomyces cerevisiae.