H
Hang Shi
Researcher at Jiangsu University
Publications - 5
Citations - 143
Hang Shi is an academic researcher from Jiangsu University. The author has contributed to research in topics: Web server & Wild type. The author has an hindex of 3, co-authored 4 publications receiving 69 citations.
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Journal ArticleDOI
Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment.
Marc F. Lensink,Guillaume Brysbaert,Nurul Nadzirin,Sameer Velankar,Raphael A. G. Chaleil,Tereza Gerguri,Paul A. Bates,Elodie Laine,Alessandra Carbone,Alessandra Carbone,Sergei Grudinin,Ren Kong,Ranran Liu,Xu Ximing,Hang Shi,Shan Chang,Miriam Eisenstein,Agnieszka S. Karczyńska,Cezary Czaplewski,Emilia A. Lubecka,Agnieszka G. Lipska,Paweł Krupa,Magdalena A. Mozolewska,Łukasz Golon,Sergey A. Samsonov,Adam Liwo,Adam Liwo,Silvia Crivelli,Guillaume Pagès,Mikhail Karasikov,Maria Kadukova,Maria Kadukova,Yumeng Yan,Sheng-You Huang,Mireia Rosell,Mireia Rosell,Luis A. Rodríguez-Lumbreras,Luis A. Rodríguez-Lumbreras,Miguel Romero-Durana,Lucía Díaz-Bueno,Juan Fernández-Recio,Juan Fernández-Recio,Charles Christoffer,Genki Terashi,Woong-Hee Shin,Tunde Aderinwale,Sai Raghavendra Maddhuri Venkata Subraman,Daisuke Kihara,Dima Kozakov,Sandor Vajda,Kathyn Porter,Dzmitry Padhorny,Israel Desta,Dmitri Beglov,Mikhail Ignatov,Sergey Kotelnikov,Sergey Kotelnikov,Iain H. Moal,David W. Ritchie,Isaure Chauvot de Beauchêne,Bernard Maigret,Marie-Dominique Devignes,Maria Elisa Ruiz Echartea,Didier Barradas-Bautista,Zhen Cao,Luigi Cavallo,Romina Oliva,Yue Cao,Yang Shen,Minkyung Baek,Taeyong Park,Hyeonuk Woo,Chaok Seok,M. Braitbard,Lirane Bitton,Dina Scheidman-Duhovny,Justas Dapkūnas,Kliment Olechnovič,Česlovas Venclovas,Petras J. Kundrotas,Saveliy Belkin,Devlina Chakravarty,Varsha D. Badal,Ilya A. Vakser,Thom Vreven,Sweta Vangaveti,Tyler M. Borrman,Zhiping Weng,Johnathan D. Guest,Ragul Gowthaman,Brian G. Pierce,Xianjin Xu,Rui Duan,Liming Qiu,Jie Hou,Benjamin Ryan Merideth,Zhiwei Ma,Jianlin Cheng,Xiaoqin Zou,Panos Koukos,Jorge Roel-Touris,Francesco Ambrosetti,Cunliang Geng,Jörg Schaarschmidt,Mikael Trellet,Adrien S. J. Melquiond,Li C. Xue,Brian Jiménez-García,Charlotte W. van Noort,Rodrigo V. Honorato,Alexandre M. J. J. Bonvin,Shoshana J. Wodak +111 more
TL;DR: CAPRI Round 46 indicates that residues in binding interfaces were less well predicted in this set of targets than in previous Rounds, providing useful insights for directions of future improvements.
Journal ArticleDOI
Prediction of protein assemblies, the next frontier: The CASP14-CAPRI experiment.
Marc F. Lensink,Guillaume Brysbaert,Théo Mauri,Nurul Nadzirin,Sameer Velankar,Raphael A. G. Chaleil,Tereza Clarence,Paul A. Bates,Ren Kong,Bin Liu,Guangbo Yang,Ming Liu,Hang Shi,Xufeng Lu,Shan Chang,Raj S. Roy,Farhan Quadir,Jian Liu,Jianlin Cheng,Anna Antoniak,Cezary Czaplewski,Artur Giełdoń,Mateusz Kogut,Agnieszka G. Lipska,Adam Liwo,Emilia A. Lubecka,Martyna Maszota-Zieleniak,Adam K. Sieradzan,Rafał Ślusarz,Patryk A. Wesołowski,Patryk A. Wesołowski,Karolina Zięba,Carlos A. Del Carpio Muñoz,Eiichiro Ichiishi,Ameya Harmalkar,Jeffrey J. Gray,Alexandre M. J. J. Bonvin,Francesco Ambrosetti,Rodrigo V. Honorato,Zuzana Jandova,Brian Jiménez-García,Panagiotis I. Koukos,Siri Camee van Keulen,Charlotte W. van Noort,Manon Réau,Jorge Roel-Touris,Sergei Kotelnikov,Dzmitry Padhorny,Kathryn A. Porter,Andrey Alekseenko,Andrey Alekseenko,Mikhail Ignatov,Israel Desta,Ryota Ashizawa,Zhuyezi Sun,Usman Ghani,Nasser Hashemi,Sandor Vajda,Dima Kozakov,Mireia Rosell,Mireia Rosell,Luis A. Rodríguez-Lumbreras,Luis A. Rodríguez-Lumbreras,Juan Fernández-Recio,Juan Fernández-Recio,Agnieszka S. Karczyńska,Sergei Grudinin,Yumeng Yan,Hao Li,Peicong Lin,Sheng-You Huang,Charles Christoffer,Genki Terashi,Jacob Verburgt,Daipayan Sarkar,Tunde Aderinwale,Xiao Wang,Daisuke Kihara,Tsukasa Nakamura,Yuya Hanazono,Ragul Gowthaman,Johnathan D. Guest,Rui Yin,Ghazaleh Taherzadeh,Brian G. Pierce,Didier Barradas-Bautista,Zhen Cao,Luigi Cavallo,Romina Oliva,Yuanfei Sun,Shaowen Zhu,Yang Shen,Taeyong Park,Hyeonuk Woo,Jinsol Yang,Sohee Kwon,Jonghun Won,Chaok Seok,Yasuomi Kiyota,Shinpei Kobayashi,Yoshiki Harada,Mayuko Takeda-Shitaka,Petras J. Kundrotas,Amar Singh,Ilya A. Vakser,Justas Dapkūnas,Kliment Olechnovič,Česlovas Venclovas,Rui Duan,Liming Qiu,Xianjin Xu,Shuang Zhang,Xiaoqin Zou,Shoshana J. Wodak +113 more
TL;DR: The results of the CAPRI Round 50, the fourth joint CASP-CAPRI protein assembly prediction challenge, were reported in this paper, where the prediction performance was measured by a weighted scoring scheme that takes into account the number of models of acceptable quality or higher submitted by each group as part of their five top ranking models.
Journal ArticleDOI
Template-based modeling and ab-initio docking using CoDock in CAPRI.
TL;DR: This CAPRI edition showed that the hybrid docking strategy called CoDock can be efficiently adapted to the increasing variety of challenges in the field of molecular interactions.
Journal ArticleDOI
Molecular dynamics simulations of wild type and mutant of Pin1 peptidyl-prolyl isomerase
TL;DR: The structural stability analysis shows that the Cys113Asp mutation leads to the higher fluctuation of hydrophobic core in PPIase domain, which may help to understand the isomerisation mechanisms of Pin1.
Journal ArticleDOI
nCoVDock2: a docking server to predict the binding modes between COVID-19 targets and its potential ligands
TL;DR: Li et al. as mentioned in this paper presented nCoVDock2, a new docking server to predict the binding modes for targets from SARS-CoV-2, especially for the variants.