I
Inchan Choi
Researcher at University of Pennsylvania
Publications - 10
Citations - 699
Inchan Choi is an academic researcher from University of Pennsylvania. The author has contributed to research in topics: Regulation of gene expression & Epigenetics. The author has an hindex of 8, co-authored 9 publications receiving 590 citations.
Papers
More filters
Journal ArticleDOI
Epigenetic regulation of the DLK1-MEG3 microRNA cluster in human type 2 diabetic islets.
Vasumathi Kameswaran,Nuria C. Bramswig,Lindsay B. McKenna,Melinda Penn,Jonathan Schug,Nicholas J. Hand,Ying Chen,Inchan Choi,Anastassios Vourekas,Kyoung-Jae Won,Chengyang Liu,Kumar Vivek,Ali Naji,Joshua R. Friedman,Klaus H. Kaestner +14 more
TL;DR: A cluster of microRNAs in an imprinted locus on human chromosome 14q32 that is highly and specifically expressed in human β cells and dramatically downregulated in islets from T2DM organ donors is identified.
Journal ArticleDOI
Histone deacetylase 3 coordinates commensal-bacteria-dependent intestinal homeostasis
Theresa Alenghat,Lisa C. Osborne,Steven A. Saenz,Dmytro Kobuley,Carly G. K. Ziegler,Shannon E. Mullican,Inchan Choi,Stephanie Grunberg,Rohini Sinha,Meghan A. Wynosky-Dolfi,Annelise G. Snyder,Paul R. Giacomin,Karen L. Joyce,Tram B. Hoang,Meenakshi Bewtra,Igor E. Brodsky,Gregory F. Sonnenberg,Frederic D. Bushman,Kyoung-Jae Won,Mitchell A. Lazar,David Artis +20 more
TL;DR: Re-derivation of HDAC3ΔIEC mice into germ-free conditions revealed that dysregulated IEC gene expression, Paneth cell homeostasis and intestinal barrier function were largely restored in the absence of commensal bacteria.
Journal ArticleDOI
RBPJ, the major transcriptional effector of Notch signaling, remains associated with chromatin throughout mitosis, suggesting a role in mitotic bookmarking.
TL;DR: The results raise the intriguing hypothesis that by collaborating with CTCF, RBPJ may participate in establishing chromatin domains and/or long-range chromatin interactions that could be propagated through cell division to maintain gene expression programs.
Journal ArticleDOI
Epigenetic regulation of intestinal stem cells by Tet1-mediated DNA hydroxymethylation.
TL;DR: In this article, the authors examined the role of TET hydroxylases in the development of the intestinal stem cells and showed that Tet1-mediated DNA hydroxymethylation plays a critical role in the epigenetic regulation of the Wnt pathway in intestinal stem and progenitor cells.
Journal ArticleDOI
5-hydroxymethylcytosine represses the activity of enhancers in embryonic stem cells: a new epigenetic signature for gene regulation
TL;DR: It is suggested that 5hmC is a new epigenetic mark for silenced enhancers, and has a repressive role at specific proximal and distal regulatory regions in mESCs, and is inversely correlated with RNA polymerase II occupancy.