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Itsuki Kiyatake
Publications - 6
Citations - 203
Itsuki Kiyatake is an academic researcher. The author has contributed to research in topics: Chiloscyllium punctatum & Genome. The author has an hindex of 3, co-authored 4 publications receiving 112 citations.
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Journal ArticleDOI
Shark genomes provide insights into elasmobranch evolution and the origin of vertebrates
Yuichiro Hara,Kazuaki Yamaguchi,Koh Onimaru,Mitsutaka Kadota,Mitsumasa Koyanagi,Sean D. Keeley,Kaori Tatsumi,Kaori Tanaka,Fumio Motone,Yuka Kageyama,Ryo Nozu,Noritaka Adachi,Osamu Nishimura,Reiko Nakagawa,Chiharu Tanegashima,Itsuki Kiyatake,Rui Matsumoto,Kiyomi Murakumo,Kiyonori Nishida,Akihisa Terakita,Shigeru Kuratani,Keiichi Sato,Susumu Hyodo,Shigehiro Kuraku +23 more
TL;DR: A thorough genome annotation revealed Hox C genes previously hypothesized to have been lost, as well as distinct gene repertories of opsins and olfactory receptors that would be associated with adaptation to unique underwater niches, and provided insights on the molecular basis of adaptation to underwater lifestyle and the evolutionary origins of vertebrates.
Journal ArticleDOI
A staging table for the embryonic development of the brownbanded bamboo shark (Chiloscyllium punctatum).
TL;DR: It is shown that bamboo shark embryos exhibit relatively fast embryonic growth and are amenable to culture, key characteristics that enhance their experimental utility, and the present study is a foundation for cartilaginous fish research.
Journal ArticleDOI
Cell culture-based karyotyping of orectolobiform sharks for chromosome-scale genome analysis.
Yoshinobu Uno,Ryo Nozu,Itsuki Kiyatake,Nobuyuki Higashiguchi,Shuji Sodeyama,Kiyomi Murakumo,Keiichi Sato,Shigehiro Kuraku +7 more
TL;DR: A new method of culturing shark fibroblasts and lymphocytes is presented, and the karyotypes of four carpet shark species are characterized, enabling whole genome analysis of these species and deepening the understanding of early vertebrate evolution at the molecular level.
Journal ArticleDOI
Squalomix: shark and ray genome analysis consortium and its data sharing platform
Osamu Nishimura,John Rozewicki,Kazuaki Yamaguchi,Kaori Tatsumi,Yuta Ohishi,Tazro Ohta,Masaru Yagura,Taiki Niwa,Chiharu Tanegashima,Akinori Teramura,Shotaro Hirase,Akane Kawaguchi,Milton Tan,Salvatore D'Aniello,Filipe Castro,Andre G. Machado,Mitsumasa Koyanagi,Akihisa Terakita,Ryo Misawa,Masayuki Horie,Junna Kawasaki,Takashi Asahida,Atsuko Yamaguchi,Kiyomi Murakumo,Rui Matsumoto,Iker Irisarri,Norio Miyamoto,Atsushi Toyoda,Sho Tanaka,Tatsuya Sakamoto,Yasuko Semba,Shin Yamauchi,Kazuyuki Yamada,Kiyonori Nishida,Itsuki Kiyatake,Keiichi Sato,Susumu Hyodo,Mitsutaka Kadota,Yoshinobu Uno,Shigehiro Kuraku +39 more
TL;DR: The Squalomix consortium is expected to be solved through a combination of in-house cytological techniques including karyotyping of cultured cells, chromatin preparation for Hi-C data acquisition, and high fidelity long-read sequencing.
Posted ContentDOI
Cell culture-based shark karyotyping as a resource for chromosome-scale genome analysis
Yoshinobu Uno,Ryo Nozu,Itsuki Kiyatake,Nobuyuki Higashiguchi,Shuji Sodeyama,Kiyomi Murakumo,Keiichi Sato,Shigehiro Kuraku +7 more
TL;DR: This work identified heteromorphic XX/XY sex chromosomes for the two latter species and demonstrated the first-ever fluorescence in situ hybridization of shark chromosomes prepared from cultured cells.