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Joseph E. Wedekind

Researcher at University of Rochester

Publications -  107
Citations -  3718

Joseph E. Wedekind is an academic researcher from University of Rochester. The author has contributed to research in topics: Riboswitch & RNA. The author has an hindex of 33, co-authored 99 publications receiving 3455 citations. Previous affiliations of Joseph E. Wedekind include University of California, San Diego & Case Western Reserve University.

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The Enolase Superfamily: A General Strategy for Enzyme-Catalyzed Abstraction of the α-Protons of Carboxylic Acids†

TL;DR: A superfamily of enzymes related by their ability to catalyze the abstraction of the alpha-proton of a carboxylic acid to form an enolic intermediate is discovered, and the established and deduced structure-function relationships in the superfamily allow the prediction that other apparent members of the family for which no catalytic functions have yet been assigned will also perform chemistry involving abstraction of their alpha-protons.
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Messenger rna editing in mammals: new members of the apobec family seeking roles in the family business

TL;DR: Several proteins have been identified as being similar to C-to-U mRNA editing enzymes based on their structural domains and the occurrence of a catalytic domain characteristic of cytidine deaminases and their structure, expression and relevance to biomedically significant processes or pathologies are considered.
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Structure-based design of novel HIV-1 protease inhibitors to combat drug resistance

TL;DR: A protein-ligand X-ray crystal structure of inhibitor 3-bound HIV-1 protease revealed extensive interactions in the HIV protease active site including strong hydrogen bonding interactions with the backbone, which may lead to novel inhibitors that can combat drug resistance.
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Refined Crystallographic Structure of Pseudomonas aeruginosa Exotoxin A and its Implications for the Molecular Mechanism of Toxicity

TL;DR: The refined structures of exotoxin A provide precise models for the design and interpretation of further studies of the mechanism of intoxication and clarify several ionic interactions within structural domains I and II that may modulate an obligatory conformational change that is induced by low pH.
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Comparison of a PreQ1 Riboswitch Aptamer in Metabolite-bound and Free States with Implications for Gene Regulation

TL;DR: In this paper, the crystal structures of the preQ1 riboswitch from Thermo-anaerobacter tengcongensis were analyzed in both bound and free states, and it was shown that the ligand pocket shifts into the pre-Q1 binding site, resulting in closed access to the metabolite while simultaneously increasing exposure of the ribosome-binding site.