J
Jun Seita
Researcher at Stanford University
Publications - 66
Citations - 12459
Jun Seita is an academic researcher from Stanford University. The author has contributed to research in topics: Stem cell & Progenitor cell. The author has an hindex of 37, co-authored 59 publications receiving 10493 citations. Previous affiliations of Jun Seita include Caliper Life Sciences & University of Tokyo.
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Journal ArticleDOI
Epigenetic memory in induced pluripotent stem cells
Kibem Kim,Akiko Doi,Bo Wen,K. Ng,Rui Zhao,Patrick Cahan,Jonghwan Kim,Martin J. Aryee,Hong Ji,Lauren I.R. Ehrlich,Lauren I.R. Ehrlich,A. Yabuuchi,A. Takeuchi,K. C. Cunniff,H. Hongguang,Shannon McKinney-Freeman,Olaia Naveiras,T. J. Yoon,T. J. Yoon,Rafael A. Irizarry,Namyoung Jung,Jun Seita,Jacob H. Hanna,Peter Murakami,Rudolf Jaenisch,Ralph Weissleder,Stuart H. Orkin,Irving L. Weissman,Andrew P. Feinberg,George Q. Daley +29 more
TL;DR: It is observed that low-passage induced pluripotent stem cells (iPSCs) derived by factor-based reprogramming of adult murine tissues harbour residual DNA methylation signatures characteristic of their somatic tissue of origin, which favours their differentiation along lineages related to the donor cell, while restricting alternative cell fates.
Epigenetic memory in induced pluripotent stem cells
Kibem Kim,Akiko Doi,Bo Wen,K. Ng,Rui Zhao,Patrick Cahan,Jonghwan Kim,Martin J. Aryee,Hong Ji,Lauren I.R. Ehrlich,Lauren I.R. Ehrlich,A. Yabuuchi,A. Takeuchi,K. C. Cunniff,H. Hongguang,Shannon McKinney-Freeman,Olaia Naveiras,T. J. Yoon,T. J. Yoon,Rafael A. Irizarry,Namyoung Jung,Jun Seita,Jacob H. Hanna,Peter Murakami,Rudolf Jaenisch,Ralph Weissleder,Stuart H. Orkin,Irving L. Weissman,Andrew P. Feinberg,George Q. Daley +29 more
TL;DR: The authors showed that low-passage induced pluripotent stem cells (iPSCs) derived by factor-based reprogramming of adult murine tissues harbor residual DNA methylation signatures characteristic of their somatic tissue of origin.
Journal ArticleDOI
Deficiencies in DNA damage repair limit the function of haematopoietic stem cells with age
Derrick J. Rossi,David Bryder,David Bryder,Jun Seita,André Nussenzweig,Jan H.J. Hoeijmakers,Irving L. Weissman +6 more
TL;DR: Although deficiencies in several genomic maintenance pathways did not deplete stem cell reserves with age, stem cell functional capacity was severely affected under conditions of stress, leading to loss of reconstitution and proliferative potential, diminished self-renewal, increased apoptosis and, ultimately, functional exhaustion.
Journal ArticleDOI
A molecular cell atlas of the human lung from single-cell RNA sequencing.
Kyle J. Travaglini,Ahmad N. Nabhan,Ahmad N. Nabhan,Lolita Penland,Rahul Sinha,Astrid Gillich,Rene Sit,Stephen Chang,Stephanie D. Conley,Yasuo Mori,Yasuo Mori,Jun Seita,Gerald J. Berry,Joseph B. Shrager,Ross J. Metzger,Christin S. Kuo,Norma Neff,Irving L. Weissman,Stephen R. Quake,Mark A. Krasnow +19 more
TL;DR: Droplet- and plate-based single cell RNA sequencing applied to ~75,000 human cells across all lung tissue compartments and circulating blood, combined with a multi-pronged cell annotation approach, have allowed them to define the gene expression profiles and anatomical locations of 58 cell populations in the human lung.
Journal ArticleDOI
Hematopoietic stem cell: self-renewal versus differentiation
Jun Seita,Irving L. Weissman +1 more
TL;DR: This review focuses on the hierarchical structure of the hematopoietic system, the current understanding of microenvironment and molecular cues regulating self‐renewal and differentiation of adult HSCs, and the currently emerging systems approaches to understand HSC biology.