K
Karin Breuer
Researcher at Simon Fraser University
Publications - 8
Citations - 1355
Karin Breuer is an academic researcher from Simon Fraser University. The author has contributed to research in topics: Login & Knowledge-based systems. The author has an hindex of 7, co-authored 8 publications receiving 1097 citations. Previous affiliations of Karin Breuer include College of Information Technology.
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Journal ArticleDOI
InnateDB: systems biology of innate immunity and beyond—recent updates and continuing curation
Karin Breuer,Amir Foroushani,Matthew R. Laird,Carol Chen,Anastasia Sribnaia,Raymond Lo,Geoffrey L. Winsor,Robert E. W. Hancock,Fiona S. L. Brinkman,David J. Lynn +9 more
TL;DR: The recent integration of bovine data makes InnateDB the first integrated network analysis platform for this agriculturally important model organism, and a range of improvements to the integrated bioinformatics solutions are reported.
Journal ArticleDOI
FlowRepository: A resource of annotated flow cytometry datasets associated with peer‐reviewed publications
TL;DR: This work states that having datasets linked to figures and summaries through a detailed explanation of the sample processing and analysis pipeline allows other scientists to ask additional questions and build upon the published findings.
Journal ArticleDOI
A new reference implementation of the PSICQUIC web service.
Noemi del-Toro,Marine Dumousseau,Sandra Orchard,Rafael C. Jimenez,Eugenia Galeota,Guillaume Launay,Johannes B. Goll,Karin Breuer,Keiichiro Ono,Lukasz Salwinski,Henning Hermjakob +10 more
TL;DR: An extension of the PSICQUIC specification (version 1.3), which has been released to be compliant with the enhanced standards in molecular interactions, is presented and offers augmented web service capabilities and improves the user experience.
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Curating the innate immunity interactome
David J. Lynn,Calvin Chan,Misbah Naseer,Melissa Yau,Raymond Lo,Anastasia Sribnaia,Giselle Ring,Jaimmie Que,Kathleen Wee,Geoffrey L. Winsor,Matthew R. Laird,Karin Breuer,Amir Foroushani,Amir Foroushani,Fiona S. L. Brinkman,Robert E. W. Hancock +15 more
TL;DR: Curation of the InnateDB interactome provides a wealth of information to enable systems-level analysis of innate immunity and provides several lines of evidence that analysis of the innate immunity interactome has the potential to identify novel signalling, transcriptional and post-transcriptional regulators of innate Immunity.
Journal ArticleDOI
Preparing a Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) Compliant Manuscript Using the International Society for Advancement of Cytometry (ISAC) FCS File Repository (FlowRepository.org)
TL;DR: This unit will mainly focus on the deposition, sharing, and annotation of flow cytometry data.