K
Kim Van Roey
Researcher at European Bioinformatics Institute
Publications - 17
Citations - 4168
Kim Van Roey is an academic researcher from European Bioinformatics Institute. The author has contributed to research in topics: Short linear motif & Eukaryotic Linear Motif resource. The author has an hindex of 12, co-authored 15 publications receiving 3543 citations.
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The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases.
Sandra Orchard,Mais G. Ammari,Bruno Aranda,Lionel Breuza,Leonardo Briganti,Fiona Broackes-Carter,Nancy H. Campbell,Gayatri Chavali,Carol Chen,Noemi del-Toro,Margaret Duesbury,Marine Dumousseau,Eugenia Galeota,Ursula Hinz,Marta Iannuccelli,Sruthi Jagannathan,Rafael C. Jimenez,Jyoti Khadake,Astrid Lagreid,Luana Licata,Ruth C. Lovering,Birgit H M Meldal,Anna N. Melidoni,Mila Milagros,Daniele Peluso,Livia Perfetto,Pablo Porras,Arathi Raghunath,Sylvie Ricard-Blum,Bernd Roechert,Andre Stutz,Michael Tognolli,Kim Van Roey,Gianni Cesareni,Henning Hermjakob +34 more
TL;DR: All data manually curated by the MINT curators have been moved into the IntAct database at EMBL-EBI and are merged with the existing IntAct dataset.
Journal ArticleDOI
Attributes of short linear motifs.
Norman E. Davey,Kim Van Roey,Robert J. Weatheritt,Grischa Toedt,Bora Uyar,Brigitte Altenberg,Aidan Budd,Francesca Diella,Holger Dinkel,Toby J. Gibson +9 more
TL;DR: Analysis of curated instances currently available in the Eukaryotic Linear Motif database suggest that functional SLiMs have higher levels of conservation than their surrounding residues, frequently evolve convergently, preferentially occur in disordered regions and often form a secondary structure when bound to their interaction partner.
Journal ArticleDOI
ELM—the database of eukaryotic linear motifs
Holger Dinkel,Sushama Michael,Robert J. Weatheritt,Norman E. Davey,Kim Van Roey,Brigitte Altenberg,Grischa Toedt,Bora Uyar,Markus Seiler,Aidan Budd,Lisa Jödicke,Marcel Andre Dammert,Christian Schroeter,Maria Hammer,Tobias Schmidt,Peter Jehl,Caroline McGuigan,Magdalena Dymecka,Claudia Chica,Katja Luck,Allegra Via,Andrew Chatr-aryamontri,Niall J. Haslam,Gleb Grebnev,Richard Edwards,Michel O. Steinmetz,Heike Meiselbach,Francesca Diella,Toby J. Gibson +28 more
TL;DR: The motif discovery portion of the ELM resource has added conservation, and structural attributes have been incorporated to aid users to discriminate biologically relevant motifs from stochastically occurring non-functional instances.
Journal ArticleDOI
Short linear motifs: ubiquitous and functionally diverse protein interaction modules directing cell regulation.
Kim Van Roey,Bora Uyar,Robert J. Weatheritt,Holger Dinkel,Markus Seiler,Aidan Budd,Toby J. Gibson,Norman E. Davey,Norman E. Davey +8 more
TL;DR: Interaction Modules Directing Cell Regulation Kim Van Roey, Bora Uyar,† Robert J. Weatheritt,‡ Holger Dinkel,† Markus Seiler,† Aidan Budd,† Toby J. Gibson,† and Norman E. Davey*.
Journal ArticleDOI
ELM 2016—data update and new functionality of the eukaryotic linear motif resource
Holger Dinkel,Kim Van Roey,Sushama Michael,Manjeet Kumar,Bora Uyar,Brigitte Altenberg,Vladislava Milchevskaya,Melanie Schneider,Helen Kühn,Annika Behrendt,Sophie Luise Dahl,Victoria Damerell,Sandra Diebel,Sara Kalman,Steffen Klein,Arne C. Knudsen,Christina Mäder,Sabina Merrill,Angelina Staudt,Vera Thiel,Lukas Welti,Norman E. Davey,Francesca Diella,Toby J. Gibson +23 more
TL;DR: The Eukaryotic Linear Motif resource is a manually curated database of short linear motifs (SLiMs) that contains more than 240 different motif classes with over 2700 experimentally validated instances.