M
Marcus C. Chibucos
Researcher at University of Maryland, Baltimore
Publications - 48
Citations - 8834
Marcus C. Chibucos is an academic researcher from University of Maryland, Baltimore. The author has contributed to research in topics: Ontology (information science) & Annotation. The author has an hindex of 27, co-authored 45 publications receiving 6660 citations. Previous affiliations of Marcus C. Chibucos include Virginia Tech & Virginia Bioinformatics Institute.
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Journal ArticleDOI
Annotated draft genome sequences of three species of Cryptosporidium: Cryptosporidium meleagridis isolate UKMEL1, C. baileyi isolate TAMU-09Q1 and C. hominis isolates TU502_2012 and UKH1.
Olukemi O. Ifeonu,Marcus C. Chibucos,Joshua Orvis,Qi Su,Kristin Elwin,Fengguang Guo,Haili Zhang,Lihua Xiao,Sun Mingfei,Rachel M. Chalmers,Claire M. Fraser,Guan Zhu,Jessica C. Kissinger,Giovanni Widmer,Joana C. Silva +14 more
TL;DR: The genome assembly of C. hominis is significantly more complete and less fragmented than that available previously, which enabled the generation of a much-improved gene set for this species, with an increase in average gene length of 500 bp relative to the protein-encoding genes in the 2004 C.hominis annotation.
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Draft Genome Sequences of Human Pathogenic Fungus Geomyces pannorum Sensu Lato and Bat White Nose Syndrome Pathogen Geomyces (Pseudogymnoascus) destructans.
Marcus C. Chibucos,Jonathan Crabtree,Sushma Nagaraj,Sudha Chaturvedi,Sudha Chaturvedi,Vishnu Chaturvedi,Vishnu Chaturvedi +6 more
TL;DR: The draft genome sequences of Geomyces pannorum sensu lato and Geomyce (Pseudogymnoascus) destructans are reported, revealing a dichotomy in the genomes of related psychrophilic fungi that is a valuable target for defining their distinct saprobic and pathogenic attributes.
Journal ArticleDOI
Single molecule sequencing and genome assembly of a clinical specimen of Loa loa, the causative agent of loiasis.
Luke J. Tallon,Xinyue Liu,Sasisekhar Bennuru,Marcus C. Chibucos,Alvaro Godinez,Sandra Ott,Xuechu Zhao,Lisa Sadzewicz,Claire M. Fraser,Thomas B. Nutman,Julie C. Dunning Hotopp +10 more
TL;DR: The result is the most complete filarial nematode assembly produced thus far and demonstrates the utility of single molecule sequencing on the Pacific Biosciences platform for genetically heterogeneous metazoan genomes.
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Annotation of gene product function from high-throughput studies using the Gene Ontology.
Helen Attrill,Pascale Gaudet,Rachael P. Huntley,Ruth C. Lovering,Stacia R. Engel,Sylvain Poux,Kimberly Van Auken,George Georghiou,Marcus C. Chibucos,Tanya Z. Berardini,Valerie Wood,Harold J. Drabkin,Petra Fey,Penelope Garmiri,Midori A. Harris,Tony Sawford,Leonore Reiser,Rebecca Tauber,Sabrina Toro +18 more
TL;DR: This work presents an annotation framework for high-throughput studies that will facilitate good standards in GO curation and, through the use of new high- throughput evidence codes, increase the visibility of these annotations to the research community.
Journal ArticleDOI
Draft Genome Sequences of the Diarrheagenic Escherichia coli Collection
Tracy H. Hazen,Jason W. Sahl,Julia C. Redman,Carolyn R. Morris,Sean C. Daugherty,Marcus C. Chibucos,Naomi Sengamalay,Claire M. Fraser-Liggett,Hans Steinsland,Thomas S. Whittam,Beth Whittam,Shannon D. Manning,David A. Rasko +12 more
TL;DR: The draft genome sequences of the collection referred to as the Escherichia coli DECA collection, which was assembled to contain representative isolates of the 15 most common diarrheagenic clones in humans, are reported.