P
Patrick McCarren
Researcher at Broad Institute
Publications - 32
Citations - 1973
Patrick McCarren is an academic researcher from Broad Institute. The author has contributed to research in topics: Histone deacetylase & Furanose. The author has an hindex of 20, co-authored 31 publications receiving 1580 citations. Previous affiliations of Patrick McCarren include Novartis & University of California, Los Angeles.
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Journal ArticleDOI
The Drug Repurposing Hub: a next-generation drug library and information resource
Steven M. Corsello,Joshua A. Bittker,Zihan Liu,Joshua Gould,Patrick McCarren,Jodi E. Hirschman,Stephen Johnston,Anita Vrcic,Bang Wong,Mariya Khan,Jacob K. Asiedu,Rajiv Narayan,Christopher C. Mader,Aravind Subramanian,Todd R. Golub +14 more
TL;DR: This work hand-curated a collection of 4,707 compounds, experimentally confirmed their identities, and annotated them with literature-reported targets, to assemble a comprehensive library of drugs that have reached the clinic and established a blueprint for others to easily assemble such a repurposing library.
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Structural and conformational determinants of macrocycle cell permeability
Björn Over,Pär Matsson,Pär Matsson,Christian Tyrchan,Per Artursson,Per Artursson,Bradley C. Doak,Michael Foley,Michael Foley,Constanze Hilgendorf,Stephen Johnston,Maurice D. Lee,Maurice D. Lee,Richard J. Lewis,Patrick McCarren,Giovanni Muncipinto,Giovanni Muncipinto,Ulf Norinder,Perry Matthew,Jeremy R Duvall,Jeremy R Duvall,Jan Kihlberg +21 more
TL;DR: Combined use of quantitative structure-permeability modeling and the procedure for conformational analysis now, for the first time, provides chemists with a rational approach to design cell- permeable non-peptidic macrocycles with potential for oral absorption.
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Origins of regioselectivity and alkene-directing effects in nickel-catalyzed reductive couplings of alkynes and aldehydes.
TL;DR: The origins of reactivity and regioselectivity in nickel-catalyzed reductive coupling reactions of alkynes and aldehydes were investigated with density functional calculations, finding that simple alkynes are controlled by steric effects, while conjugated enynes and diynes are predicted to have increased reactsivity and very high regiOSElectivities.
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A small-molecule allosteric inhibitor of Mycobacterium tuberculosis tryptophan synthase
Samantha Wellington,Partha P. Nag,Karolina Michalska,Stephen Johnston,Robert Jedrzejczak,Robert Jedrzejczak,Virendar K. Kaushik,Anne E. Clatworthy,Noman Siddiqi,Patrick McCarren,Besnik Bajrami,Natalia Maltseva,Senya Combs,Stewart L. Fisher,Andrzej Joachimiak,Andrzej Joachimiak,Stuart L. Schreiber,Stuart L. Schreiber,Deborah T. Hung,Deborah T. Hung +19 more
TL;DR: It is shown that TrpAB is required for the survival of Mtb and Mycobacterium marinum in vivo and that this requirement may be independent of an adaptive immune response, and suggests a framework for the discovery of a next generation of allosteric inhibitors.
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Arabinofuranosyl Oligosaccharides from Mycobacteria: Synthesis and Effect of Glycosylation on Ring Conformation and Hydroxymethyl Group Rotamer Populations
TL;DR: A series of α-d-arabinofuranosyl oligosaccharides (2−8) that are fragments of the arabinan portions of two polysaccharides present in the cell wall of Mycobacterium tuberculosis have been synthesized as discussed by the authors.