P
Pingchuan Li
Researcher at Agriculture and Agri-Food Canada
Publications - 13
Citations - 1127
Pingchuan Li is an academic researcher from Agriculture and Agri-Food Canada. The author has contributed to research in topics: Genome & Genome evolution. The author has an hindex of 10, co-authored 13 publications receiving 783 citations.
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Journal ArticleDOI
Genome sequence of the progenitor of the wheat D genome Aegilops tauschii
Ming-Cheng Luo,Yong Q. Gu,Daniela Puiu,Hao Wang,Sven Twardziok,Karin R. Deal,Naxin Huo,Naxin Huo,Tingting Zhu,Le Wang,Yi Wang,Yi Wang,Patrick E. McGuire,Shuyang Liu,Hai Long,Ramesh K Ramasamy,Juan C Rodriguez,Sonny Lee Van,Luxia Yuan,Zhenzhong Wang,Zhenzhong Wang,Zhiqiang Xia,Lichan Xiao,Olin D. Anderson,Shuhong Ouyang,Shuhong Ouyang,Yong Liang,Yong Liang,Aleksey V. Zimin,Geo Pertea,Peng Qi,Jeffrey L. Bennetzen,Xiongtao Dai,Matthew W Dawson,Hans-Georg Müller,Karl G. Kugler,Lorena Rivarola-Duarte,Manuel Spannagl,Klaus F. X. Mayer,Fu-Hao Lu,Michael W. Bevan,Philippe Leroy,Pingchuan Li,Frank M. You,Qixin Sun,Zhiyong Liu,Eric Lyons,Thomas Wicker,Steven L. Salzberg,Steven L. Salzberg,Katrien M. Devos,Jan Dvořák +51 more
TL;DR: It is proposed that the vast amounts of very similar repeated sequences cause frequent errors in recombination and lead to gene duplications and structural chromosome changes that drive fast genome evolution.
Journal ArticleDOI
Disease Resistance Gene Analogs (RGAs) in Plants
TL;DR: This review focuses on recent advances in structures and mechanisms of RGAs, and their identification from sequenced genomes using bioinformatics tools, and applications in enhancing fine mapping and cloning of plant disease resistance genes are discussed.
Journal ArticleDOI
RGAugury: a pipeline for genome-wide prediction of resistance gene analogs (RGAs) in plants
Pingchuan Li,Xiande Quan,Gaofeng Jia,Gaofeng Jia,Jin Xiao,Jin Xiao,Sylvie Cloutier,Frank M. You +7 more
TL;DR: RGAugury is an efficiently integrative bioinformatics tool for large scale genome-wide identification of RGAs and was successfully applied to predict RGAs for 50 sequenced plant genomes.
Journal ArticleDOI
Chromosome-scale pseudomolecules refined by optical, physical and genetic maps in flax.
Frank M. You,Jin Xiao,Jin Xiao,Pingchuan Li,Zhen Yao,Gaofeng Jia,Gaofeng Jia,Liqiang He,Tingting Zhu,Ming-Cheng Luo,Xiue Wang,Michael K. Deyholos,Sylvie Cloutier +12 more
TL;DR: Evidence from the chromosome-scale pseudomolecules suggests that flax has undergone palaeopolyploidsization and mesopolyploidization events, followed by rearrangements and deletions or fusion of chromosome arms from an ancient progenitor with a haploid chromosome number of eight.
Journal ArticleDOI
Synteny analysis in Rosids with a walnut physical map reveals slow genome evolution in long-lived woody perennials
Ming-Cheng Luo,Frank M. You,Pingchuan Li,Jirui Wang,Jirui Wang,Tingting Zhu,Abhaya M. Dandekar,Charles A. Leslie,Mallikarjuna K. Aradhya,Patrick E. McGuire,Jan Dvorak +10 more
TL;DR: Slow rates of nucleotide substitution are accompanied by slow rates of synteny erosion during genome divergence in woody perennials.