R
Rachel L. Skelton
Researcher at Vanderbilt University
Publications - 9
Citations - 1414
Rachel L. Skelton is an academic researcher from Vanderbilt University. The author has contributed to research in topics: Genome & Comparative genomics. The author has an hindex of 7, co-authored 9 publications receiving 1312 citations.
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The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
Ray Ming,Shaobin Hou,Yun Feng,Qingyi Yu,Alexandre Dionne-Laporte,Jimmy H. Saw,Pavel Senin,Wei Wang,Benjamin V. Ly,Kanako L. T. Lewis,Steven L. Salzberg,Lu Feng,Matthew Jones,Rachel L. Skelton,Jan E. Murray,Cuixia Chen,Wubin Qian,Junguo Shen,Peng Du,Moriah Eustice,Eric J. Tong,Haibao Tang,Eric Lyons,Robert E. Paull,Todd P. Michael,Kerr Wall,Danny W. Rice,Henrik H. Albert,Ming Li Wang,Yun J. Zhu,Michael C. Schatz,Niranjan Nagarajan,Ricelle A. Acob,Peizhu Guan,Andrea Blas,Ching Man Wai,Christine M. Ackerman,Yan Ren,Chao Liu,Jianmei Wang,Jianping Wang,Jong Kuk Na,Eugene V. Shakirov,Brian J. Haas,Jyothi Thimmapuram,David R. Nelson,Xiyin Wang,John E. Bowers,Andrea R. Gschwend,Arthur L. Delcher,Ratnesh Singh,Jon Y. Suzuki,Savarni Tripathi,Neupane Kabi Raj,Hairong Wei,Beth Irikura,Maya Devi Paidi,Ning Jiang,Wenli Zhang,Gernot G. Presting,Aaron J. Windsor,Rafael Navajas-Pérez,Manuel J. Torres,F. Alex Feltus,Brad W. Porter,Yingjun Li,A. Max Burroughs,Ming-Cheng Luo,Lei Liu,David A. Christopher,Stephen M. Mount,Paul H. Moore,Tak Sugimura,Jiming Jiang,Mary A. Schuler,Vikki Friedman,Thomas Mitchell-Olds,Dorothy E. Shippen,Claude W. dePamphilis,Jeffrey D. Palmer,Michael Freeling,Andrew H. Paterson,Dennis Gonsalves,Lei Wang,Maqsudul Alam +84 more
TL;DR: Papaya offers numerous advantages as a system for fruit-tree functional genomics, and this draft genome sequence provides the foundation for revealing the basis of Carica’s distinguishing morpho-physiological, medicinal and nutritional properties.
Journal ArticleDOI
A physical map of the papaya genome with integrated genetic map and genome sequence
Qingyi Yu,Eric J. Tong,Rachel L. Skelton,John E. Bowers,Matthew Jones,Jan E. Murray,Shaobin Hou,Peizhu Guan,Ricelle A. Acob,Ming-Cheng Luo,Paul H. Moore,Maqsudul Alam,Andrew H. Paterson,Ray Ming +13 more
TL;DR: A BAC-based physical map of papaya was constructed and integrated with the genetic map and genome sequence, and is a valuable resource for comparative genomics and map-based cloning of agronomically and economically important genes and for sex chromosome research.
Journal ArticleDOI
Chromosomal location and gene paucity of the male specific region on papaya Y chromosome
Qingyi Yu,Shaobin Hou,Roman Hobza,F. Alex Feltus,Xiue Wang,Weiwei Jin,Rachel L. Skelton,Andrea Blas,Cornelia Lemke,Jimmy H. Saw,Paul H. Moore,Maqsudul Alam,Jiming Jiang,Andrew H. Paterson,Boris Vyskot,Ray Ming +15 more
TL;DR: This work investigated the chromosomal location of papaya’s small male specific region of the hermaphrodite Y (Yh) chromosome (MSY) and its genomic features, which resulted in the largest collection of contiguous genomic DNA sequences of a Y chromosome in flowering plants.
Journal ArticleDOI
Construction of a Sequence-Tagged High-Density Genetic Map of Papaya for Comparative Structural and Evolutionary Genomics in Brassicales
Cuixia Chen,Qingyi Yu,Shaobin Hou,Yingjun Li,Moriah Eustice,Rachel L. Skelton,Olivia Veatch,Rachel E. Herdes,Lauren Diebold,Jimmy H. Saw,Yun Feng,Wubin Qian,Lee H. Bynum,Lei Wang,Paul H. Moore,Robert E. Paull,Maqsudul Alam,Ray Ming +17 more
TL;DR: A high-density sequence-tagged genetic map of papaya was constructed using microsatellite markers derived from BAC end sequences and whole-genome shot gun sequences that validates the suppression of recombination at the male-specific region of the Y chromosome mapped on LG 1 and at potential centromeric regions of other LGs.
Journal ArticleDOI
Analysis of papaya BAC end sequences reveals first insights into the organization of a fruit tree genome
Chun Wan J. Lai,Qingyi Yu,Shaobin Hou,Rachel L. Skelton,Matthew Jones,Kanako L. T. Lewis,Jan E. Murray,Moriah Eustice,Peizhu Guan,Ricelle Agbayani,Paul H. Moore,Ray Ming,Gernot G. Presting +12 more
TL;DR: Analysis of 4.7% of the papaya genome based on BAC end sequences representing 17 million high-quality bases supports recent observations of frequent genome rearrangements in the Arabidopsis lineage and suggests that the poplar genome sequence may be more useful for elucidating the Papaya and other rosid genomes.