J
Jan E. Murray
Researcher at University of Illinois at Urbana–Champaign
Publications - 10
Citations - 1796
Jan E. Murray is an academic researcher from University of Illinois at Urbana–Champaign. The author has contributed to research in topics: Genome & Comparative genomics. The author has an hindex of 8, co-authored 10 publications receiving 1639 citations. Previous affiliations of Jan E. Murray include University of Granada.
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Journal ArticleDOI
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)
Ray Ming,Shaobin Hou,Yun Feng,Qingyi Yu,Alexandre Dionne-Laporte,Jimmy H. Saw,Pavel Senin,Wei Wang,Benjamin V. Ly,Kanako L. T. Lewis,Steven L. Salzberg,Lu Feng,Matthew Jones,Rachel L. Skelton,Jan E. Murray,Cuixia Chen,Wubin Qian,Junguo Shen,Peng Du,Moriah Eustice,Eric J. Tong,Haibao Tang,Eric Lyons,Robert E. Paull,Todd P. Michael,Kerr Wall,Danny W. Rice,Henrik H. Albert,Ming Li Wang,Yun J. Zhu,Michael C. Schatz,Niranjan Nagarajan,Ricelle A. Acob,Peizhu Guan,Andrea Blas,Ching Man Wai,Christine M. Ackerman,Yan Ren,Chao Liu,Jianmei Wang,Jianping Wang,Jong Kuk Na,Eugene V. Shakirov,Brian J. Haas,Jyothi Thimmapuram,David R. Nelson,Xiyin Wang,John E. Bowers,Andrea R. Gschwend,Arthur L. Delcher,Ratnesh Singh,Jon Y. Suzuki,Savarni Tripathi,Neupane Kabi Raj,Hairong Wei,Beth Irikura,Maya Devi Paidi,Ning Jiang,Wenli Zhang,Gernot G. Presting,Aaron J. Windsor,Rafael Navajas-Pérez,Manuel J. Torres,F. Alex Feltus,Brad W. Porter,Yingjun Li,A. Max Burroughs,Ming-Cheng Luo,Lei Liu,David A. Christopher,Stephen M. Mount,Paul H. Moore,Tak Sugimura,Jiming Jiang,Mary A. Schuler,Vikki Friedman,Thomas Mitchell-Olds,Dorothy E. Shippen,Claude W. dePamphilis,Jeffrey D. Palmer,Michael Freeling,Andrew H. Paterson,Dennis Gonsalves,Lei Wang,Maqsudul Alam +84 more
TL;DR: Papaya offers numerous advantages as a system for fruit-tree functional genomics, and this draft genome sequence provides the foundation for revealing the basis of Carica’s distinguishing morpho-physiological, medicinal and nutritional properties.
Journal ArticleDOI
Sequencing papaya X and Y h chromosomes reveals molecular basis of incipient sex chromosome evolution
Jianping Wang,Jong Kuk Na,Jong Kuk Na,Qingyi Yu,Andrea R. Gschwend,Jennifer Han,Fanchang Zeng,Rishi Aryal,Robert VanBuren,Jan E. Murray,Wenli Zhang,Rafael Navajas-Pérez,Rafael Navajas-Pérez,F. Alex Feltus,F. Alex Feltus,Cornelia Lemke,Eric J. Tong,Cuixia Chen,Cuixia Chen,Ching Man Wai,Ratnesh Singh,Ming Li Wang,Xiang Jia Min,Maqsudul Alam,Deborah Charlesworth,Paul H. Moore,Jiming Jiang,Andrew H. Paterson,Ray Ming +28 more
TL;DR: Sequencing the hermaphrodite-specific region of the Yh chromosome and its X counterpart revealed two evolutionary strata in the X chromosome, corresponding to the two inversions on the HSY, the older of which evolved about 7.0 million years ago.
Journal ArticleDOI
Microcollinearity between autopolyploid sugarcane and diploid sorghum genomes
Jianping Wang,Bruce A. Roe,Simone L. Macmil,Qingyi Yu,Jan E. Murray,Haibao Tang,Cuixia Chen,Fares Z. Najar,Graham B. Wiley,John E. Bowers,Marie-Anne Van Sluys,Daniel S. Rokhsar,Matthew E. Hudson,Stephen P. Moose,Andrew H. Paterson,Ray Ming +15 more
TL;DR: The comparable gene density between sugarcane BACs and corresponding sorghum sequences defied the notion that polyploidy species might have faster pace of gene loss due to the redundancy of multiple alleles at each locus, and can be used as a template for assembling much of the genic DNA of the autopolyploid Sugarcane genome.
Journal ArticleDOI
A physical map of the papaya genome with integrated genetic map and genome sequence
Qingyi Yu,Eric J. Tong,Rachel L. Skelton,John E. Bowers,Matthew Jones,Jan E. Murray,Shaobin Hou,Peizhu Guan,Ricelle A. Acob,Ming-Cheng Luo,Paul H. Moore,Maqsudul Alam,Andrew H. Paterson,Ray Ming +13 more
TL;DR: A BAC-based physical map of papaya was constructed and integrated with the genetic map and genome sequence, and is a valuable resource for comparative genomics and map-based cloning of agronomically and economically important genes and for sex chromosome research.
Journal ArticleDOI
Low X/Y divergence in four pairs of papaya sex‐linked genes
Qingyi Yu,Shaobin Hou,F. Alex Feltus,Matthew Jones,Jan E. Murray,Olivia Veatch,Cornelia Lemke,Jimmy H. Saw,Richard C. Moore,Jyothi Thimmapuram,Lei Liu,Paul H. Moore,Maqsudul Alam,Jiming Jiang,Andrew H. Paterson,Ray Ming +15 more
TL;DR: The findings indicate that sex chromosomes did not evolve at the family level in Caricaceae, and reinforce the theory that sex chromosome evolved at the species level in some lineages.