The halogen bond occurs when there is evidence of a net attractive interaction between an electrophilic region associated with a halogen atom in a molecular entity and a nucleophilic region in another, or the same, molecular entity. In this fairly extensive review, after a brief history of the interaction, we will provide the reader with a snapshot of where the research on the halogen bond is now, and, perhaps, where it is going. The specific advantages brought up by a design based on the use of the halogen bond will be demonstrated in quite different fields spanning from material sciences to biomolecular recognition and drug design.

The Halogen Bond

: The unpolarized absorption and circular dichroism spectra of the fundamental vibrational transitions of the chiral molecule, 4-methyl-2-oxetanone, are calculated ab initio. Harmonic force fields are obtained using Density Functional Theory (DFT), MP2, and SCF methodologies and a 5S4P2D/3S2P (TZ2P) basis set. DFT calculations use the Local Spin Density Approximation (LSDA), BLYP, and Becke3LYP (B3LYP) density functionals. Mid-IR spectra predicted using LSDA, BLYP, and B3LYP force fields are of significantly different quality, the B3LYP force field yielding spectra in clearly superior, and overall excellent, agreement with experiment. The MP2 force field yields spectra in slightly worse agreement with experiment than the B3LYP force field. The SCF force field yields spectra in poor agreement with experiment.The basis set dependence of B3LYP force fields is also explored: the 6-31G* and TZ2P basis sets give very similar results while the 3-21G basis set yields spectra in substantially worse agreements with experiment. jg

Ab initio calculation of vibrational absorption and circular dichroism spectra using density functional force fields

Interactions of “organic fluorine” have gained great interest not only in the context of crystal engineering, but also in the systematic design of functional materials. The first part of this tutorial review presents an overview on interactions known by organic fluorine. This involves π–πF, C–F⋯H, F⋯F, C–F⋯πF, C–F⋯π, C–F⋯M+, C–F⋯CO and anion–πF interactions, as well as other halogen bonds. The effect of the exchange of H vs. F is discussed by means of several examples and a short introduction to the young field of “fluorous” chemistry is given. The second part is dedicated to numerous applications of fluorine and fluorous interactions. It is shown how application of fluorination is used to enable a number of reactions, to improve materials properties and even open up new fields of research.

Organic fluorine compounds: a great opportunity for enhanced materials properties.

Functionalization of fluorinated molecules by transition-metal-mediated C-F bond activation to access fluorinated building blocks.

The recent fits of additive covalent radii RAB = rA + rB for the title systems are reviewed and compared with alternative systems of radii by other authors or with further experimental data. The agreement of the predicted R with experiment is good, provided that the A–B bond is not too ionic, or the coordination numbers of the two atoms too different from the original input data, used in the fit. Bonds between transition metals and halides are not included in the single-bond set, because of their partial multiple-bond character.

Additive covalent radii for single-, double-, and triple-bonded molecules and tetrahedrally bonded crystals: a summary.

One of the most important classifications in chemistry and within the periodic table is the concept of formal oxidation states. The preparation and characterization of compounds containing elements with unusual oxidation states is of great interest to chemists. The highest experimentally known formal oxidation state of any chemical element is at present VIII, although higher oxidation states have been postulated. Compounds with oxidation state VIII include several xenon compounds (for example XeO4 and XeO3F2) and the well-characterized species RuO4 and OsO4 (refs 2-4). Iridium, which has nine valence electrons, is predicted to have the greatest chance of being oxidized beyond the VIII oxidation state. In recent matrix-isolation experiments, the IrO4 molecule was characterized as an isolated molecule in rare-gas matrices. The valence electron configuration of iridium in IrO4 is 5d(1), with a formal oxidation state of VIII. Removal of the remaining d electron from IrO4 would lead to the iridium tetroxide cation ([IrO4](+)), which was recently predicted to be stable and in which iridium is in a formal oxidation state of IX. There has been some speculation about the formation of [IrO4](+) species, but these experimental observations have not been structurally confirmed. Here we report the formation of [IrO4](+) and its identification by infrared photodissociation spectroscopy. Quantum-chemical calculations were carried out at the highest level of theory that is available today, and predict that the iridium tetroxide cation, with a Td-symmetrical structure and a d(0) electron configuration, is the most stable of all possible [IrO4](+) isomers.

Identification of an iridium-containing compound with a formal oxidation state of IX

Laser-ablation experiments with metals provide a source of electrons for capture processes, which are codeposited with solid argon and neon containing molecular fluorine. New argon and neon matrix absorptions at 510.6 and 524.7 cm−1, respectively, are photosensitive upon irradiation at >290 nm, which is consistent with their assignment to an isolated anion. These bands are below the [M]+[F3]− antisymmetric trifluoride stretching frequency of 550 cm−1 in an argon matrix, which is the typical relationship for cation−anion complexes and matrix-isolated anions. Thus, we report the isolated [F3]− anion in solid argon and neon environments. Moreover, we have carried out quantum-chemical calculations up to and including the CCSD(T) method to investigate the stabilities of polyfluoride anions higher than the [F3]− anion.

Polyfluoride Anions, a Matrix-Isolation and Quantum-Chemical Investigation

This Review deals with the evolving field of polyhalogen chemistry, specifically polyhalogen anions (polyhalides). In addition to a historical outline, current progress in synthetic approaches towards the formation of polyfluorides, polychlorides, polybromides, and polyinterhalides is also illustrated. The structural diversity of polyhalides has substantially increased in the past decade, especially for polychlorides and polybromides, which are commonly characterized by single-crystal X-ray diffraction, Raman spectroscopy, and quantum-chemical calculations. Polyfluorides have been examined by sophisticated state-of-the-art quantum-chemical calculations and investigated spectroscopically in noble gas matrix-isolation experiments under cryogenic conditions at 4 K. The bonding in such polyhalide systems is also discussed. The last Section deals with applications of polyhalides in halogenation reactions and electrochemistry as well as their use as reactive ionic liquids, emphasizing the promising future of polyhalogen chemistry.

Polyhalogen and Polyinterhalogen Anions from Fluorine to Iodine.

The reactions of laser-ablated Au, Ag, and Cu atoms with F(2) in excess argon and neon gave new absorptions in the M-F stretching region of their IR spectra, which were assigned to metal-fluoride species. For gold, a Ng-AuF bond was identified in mixed neon/argon samples. However, this bonding was much weaker with AgF and CuF. Molecules MF(2) and MF(3) (M=Au, Ag, Cu) were identified from the isotopic distribution of the Cu and Ag atoms, comparison of the frequencies for three metal fluorides, and theoretical frequency calculations. The AuF(5) molecule was characterized by its strongest stretching mode and theoretical frequency calculations. Additional evidence was observed for the formation of the Au(2) F(6) molecule.

Matrix Infrared Spectroscopy and Quantum-Chemical Calculations for the Coinage-Metal Fluorides: Comparisons of Ar ? AuF, Ne ? AuF, and Molecules MF2 and MF3

Sebastian Riedel

Papers

Identification of an iridium-containing compound with a formal oxidation state of IX

Polyfluoride Anions, a Matrix-Isolation and Quantum-Chemical Investigation

Polyhalogen and Polyinterhalogen Anions from Fluorine to Iodine.

Matrix Infrared Spectroscopy and Quantum-Chemical Calculations for the Coinage-Metal Fluorides: Comparisons of Ar ? AuF, Ne ? AuF, and Molecules MF2 and MF3

Formation and characterization of the iridium tetroxide molecule with iridium in the oxidation state +VIII.