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Tanja Slotte

Researcher at Science for Life Laboratory

Publications -  76
Citations -  3615

Tanja Slotte is an academic researcher from Science for Life Laboratory. The author has contributed to research in topics: Capsella & Capsella rubella. The author has an hindex of 29, co-authored 71 publications receiving 2975 citations. Previous affiliations of Tanja Slotte include University of Toronto & Uppsala University.

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The impact of linked selection on plant genomic variation

TL;DR: The impact of genome architecture and mating system on the expected signature of linked selection in plants is discussed and empirical evidence for linked selection is reviewed, with a focus on plant model systems.
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Rapid Evolution of Genomic Imprinting in Two Species of the Brassicaceae

TL;DR: The genome-wide imprinting status of Capsella rubella was analyzed, revealing that a subset of imprinted genes play an important functional role and are therefore maintained in plants and that MEGs and PEGs differ in their targeting by 24-nucleotide small RNAs and asymmetric DNA methylation, suggesting different mechanisms establishing DNA methylations.
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Intrageneric phylogeny of Capsella (Brassicaceae) and the origin of the tetraploid C. bursa-pastoris based on chloroplast and nuclear DNA sequences.

TL;DR: This study is the first of a wild, nonmodel plant genus that uses a combination of chloroplast and multiple low-copy nuclear loci for phylogenetic inference of polyploid evolution and does not lend support to previous hypotheses on the origin of C. bursa-pastoris.
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Long-term balancing selection drives evolution of immunity genes in Capsella.

TL;DR: Re reconstructing the evolution of the disease-related locus MLO2b, it is found that divergence between ancient haplotypes can be obscured by referenced based re-sequencing methods, and that trans-specific alleles can encode substantially diverged protein sequences.
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Paternally expressed imprinted genes associate with hybridization barriers in Capsella

TL;DR: It is proposed that variation in transposable element insertions, the resulting differences in PEG number and divergence in their expression level form one component of the effective ploidy variation between species of different breeding system histories, and, as a consequence, allow the establishment of endosperm-based hybridization barriers.