U
Utku Avci
Researcher at University of Georgia
Publications - 47
Citations - 3085
Utku Avci is an academic researcher from University of Georgia. The author has contributed to research in topics: Cell wall & Lignin. The author has an hindex of 24, co-authored 41 publications receiving 2640 citations. Previous affiliations of Utku Avci include North Carolina State University & United States Department of Energy.
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Journal ArticleDOI
An Arabidopsis Cell Wall Proteoglycan Consists of Pectin and Arabinoxylan Covalently Linked to an Arabinogalactan Protein
Li Tan,Stefan Eberhard,Sivakumar Pattathil,Clayton Warder,John Glushka,Chunhua Yuan,Zhangying Hao,Xiang Zhu,Utku Avci,Jeffrey S. Miller,David Baldwin,Charles Pham,Ron Orlando,Alan G. Darvill,Michael G. Hahn,Marcia J. Kieliszewski,Debra Mohnen +16 more
TL;DR: A cell wall proteoglycan with pectin and arabinoxylan covalently attached to an arabinogalactan protein is described, identifying a cross-linked matrix polysaccharide wall protein architecture with implications for wall structure, function, and synthesis.
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A Comprehensive Toolkit of Plant Cell Wall Glycan-Directed Monoclonal Antibodies
Sivakumar Pattathil,Utku Avci,David Baldwin,Alton G. Swennes,Janelle A. McGill,Zoë A. Popper,Tracey Bootten,Anathea Albert,Ruth H. Davis,Chakravarthy Chennareddy,Ruihua Dong,Beth O'Shea,Ray Rossi,Christine Leoff,Glenn Freshour,Rajesh Narra,Malcolm A. O'Neil,William S. York,Michael G. Hahn +18 more
TL;DR: The epitopes recognized by many of the mAbs in the toolkit, particularly those recognizing arabinose- and/or galactose-containing structures, are present on more than one glycan class, consistent with the known structural diversity and complexity of plant cell wall glycans.
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Mutation of WRKY transcription factors initiates pith secondary wall formation and increases stem biomass in dicotyledonous plants
TL;DR: It is shown that WRKY transcription factors are in part responsible for the parenchymatous nature of the pith cells in dicotyledonous plants and opens up the possibility of significantly increasing the mass of fermentable cell wall components in bioenergy crops.
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XND1, a member of the NAC domain family in Arabidopsis thaliana, negatively regulates lignocellulose synthesis and programmed cell death in xylem.
TL;DR: The authors showed that XND1 overexpressions of Arabidopsis NAC domain transcription factor (XND1) resulted in extreme dwarfism associated with the absence of xylem vessels and little or no expression of tracheary element marker genes.
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Next-generation ammonia pretreatment enhances cellulosic biofuel production
Leonardo da Costa Sousa,Mingjie Jin,Mingjie Jin,Shishir P. S. Chundawat,Vijay V. Bokade,Xiaoyu Tang,Ali Azarpira,Fachuang Lu,Utku Avci,James F. Humpula,Nirmal Uppugundla,Christa Gunawan,Sivakumar Pattathil,Albert M. Cheh,Ninad Kothari,Rajeev Kumar,John Ralph,Michael G. Hahn,Charles E. Wyman,Seema Singh,Blake A. Simmons,Bruce E. Dale,Venkatesh Balan +22 more
TL;DR: A new liquid ammonia pretreatment methodology called Extractive Ammonia (EA) was developed to simultaneously convert native crystalline cellulose Iβ (CI) to a highly digestible cellulose IIII (CIII) allomorph and selectively extract up to ∼45% of the lignin from lignocellulosic biomass with near-quantitative retention of all polysaccharides as mentioned in this paper.