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Xue Xiao
Researcher at Chinese Academy of Sciences
Publications - 11
Citations - 875
Xue Xiao is an academic researcher from Chinese Academy of Sciences. The author has contributed to research in topics: Enterotoxigenic Escherichia coli & Dysbiosis. The author has an hindex of 8, co-authored 10 publications receiving 691 citations. Previous affiliations of Xue Xiao include Capital Medical University.
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Journal ArticleDOI
Dysbiosis Signature of Fecal Microbiota in Colorectal Cancer Patients
Na Wu,Xi Yang,Ruifen Zhang,Jun Li,Xue Xiao,Yongfei Hu,Yanfei Chen,Fengling Yang,Na Lu,Zhiyun Wang,Chunguang Luan,Yulan Liu,Baohong Wang,Charlie Xiang,Yuezhu Wang,Fangqing Zhao,George F. Gao,Shengyue Wang,Lanjuan Li,Haizeng Zhang,Baoli Zhu +20 more
TL;DR: The dysbiosis of fecal microbiota, characterized by the enrichment of potential pathogens and the decrease in butyrate-producing members, may represent a specific microbial signature of CRC.
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HTQC: a fast quality control toolkit for Illumina sequencing data
TL;DR: The HTQC toolkit can generate reads quality assessment faster than existing tools, providing guidance for reads filtration utilities that allow users to choose different strategies to remove low quality reads.
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Dysbiosis of Fungal Microbiota in the Intestinal Mucosa of Patients with Colorectal Adenomas
Chunguang Luan,Lingling Xie,Xi Yang,Huifang Miao,Na Lv,Ruifen Zhang,Xue Xiao,Yongfei Hu,Yulan Liu,Na Wu,Yuanmin Zhu,Baoli Zhu +11 more
TL;DR: The fungal microbiota profile of subjects with adenomas was characterized by deep sequencing and potential diagnostic biomarkers closely related to different stages ofAdenomas were identified and the size ofadenomas and the disease stage were close related to changes in thefungal microbiota in subjects with Adenomas.
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Novel plasmid and its variant harboring both a bla(NDM-1) gene and type IV secretion system in clinical isolates of Acinetobacter lwoffii.
Hongyan Hu,Yongfei Hu,Yuanlong Pan,Hui Liang,Haiyan Wang,Xiumei Wang,Qin-Fang Hao,Xiaoli Yang,Xi Yang,Xue Xiao,Chunguang Luan,Yi Yang,Yujun Cui,Ruifu Yang,George F. Gao,Yajun Song,Baoli Zhu +16 more
TL;DR: The plasmid pNDM-BJ01 as discussed by the authors contains both a bla NDM-1 gene and a type IV secretion system (T4SS) gene cluster.
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TCRklass: A New K-String–Based Algorithm for Human and Mouse TCR Repertoire Characterization
Xi Yang,Di Liu,Na Lv,Fangqing Zhao,Fei Liu,Jing Zou,Yan Chen,Xue Xiao,Jun Wu,Peipei Liu,Jing Gao,Yongfei Hu,Yongfei Hu,Yi Shi,Jun Liu,Jun Liu,Ruifen Zhang,Chen Chen,Juncai Ma,George F. Gao,Baoli Zhu,Baoli Zhu +21 more
TL;DR: An integrated pipeline, TCRklass, is developed using K-string–based algorithm that has significantly improved the accuracy and performance over existing tools for TCR repertoire analysis, and it demonstrated higher reliability on CDR3 identification and much less biased V/J profiling.