F
Fangqing Zhao
Researcher at Chinese Academy of Sciences
Publications - 139
Citations - 10283
Fangqing Zhao is an academic researcher from Chinese Academy of Sciences. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 41, co-authored 129 publications receiving 7705 citations. Previous affiliations of Fangqing Zhao include Wenzhou Medical College & Peking Union Medical College.
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Journal ArticleDOI
Gut microbiota dysbiosis contributes to the development of hypertension.
Jing-Jing Li,Jing-Jing Li,Fangqing Zhao,Yidan Wang,Junru Chen,Jie Tao,Gang Tian,Shouling Wu,Wenbin Liu,Qinghua Cui,Bin Geng,Weili Zhang,Ryan Weldon,Kelda Auguste,Lei Yang,Xiaoyan Liu,Li Chen,Li Chen,Li Chen,Xinchun Yang,Baoli Zhu,Baoli Zhu,Jun Cai +22 more
TL;DR: A novel causal role of aberrant gut microbiota in contributing to the pathogenesis of hypertension is described and the significance of early intervention for pre-hypertension was emphasized.
Journal ArticleDOI
CIRI: an efficient and unbiased algorithm for de novo circular RNA identification.
TL;DR: A novel chiastic clipping signal-based algorithm, CIRI, is presented, to unbiasedly and accurately detect circRNAs from transcriptome data by employing multiple filtration strategies and to identify and experimentally validate the prevalence of intronic/intergenic circ RNAs as well as fragments specific to them in the human transcriptome.
Journal ArticleDOI
Metagenome-wide analysis of antibiotic resistance genes in a large cohort of human gut microbiota
Yongfei Hu,Xi Yang,Junjie Qin,Na Lu,Gong Cheng,Na Wu,Yuanlong Pan,Jing Li,Liying Zhu,Xin Wang,Zhiqi Meng,Fangqing Zhao,Di Liu,Juncai Ma,Nan Qin,Chunsheng Xiang,Yonghong Xiao,Lanjuan Li,Huanming Yang,Jian Wang,Ruifu Yang,George F. Gao,Jun Wang,Baoli Zhu +23 more
TL;DR: It is found that Chinese individuals harbour the highest number and abundance of antibiotic resistance genes, followed by Danish and Spanish individuals, and single-nucleotide polymorphism-based analysis indicates that antibiotic resistant genes from the two European populations are more closely related while the Chinese ones are clustered separately.
Journal ArticleDOI
Complete Khoisan and Bantu genomes from southern Africa
Stephan C. Schuster,Webb Miller,Aakrosh Ratan,Lynn P. Tomsho,Belinda Giardine,Lindsay R. Kasson,Robert S. Harris,Desiree C. Petersen,Fangqing Zhao,Ji Qi,Can Alkan,Jeffrey M. Kidd,Yazhou Sun,Daniela I. Drautz,Pascal Bouffard,Donna M. Muzny,Jeffrey G. Reid,Lynne V. Nazareth,Qingyu Wang,Richard Burhans,Cathy Riemer,Nicola E. Wittekindt,Priya Moorjani,Elizabeth A. Tindall,Charles G. Danko,Wee Siang Teo,Anne M. Buboltz,Zhenhai Zhang,Qianyi Ma,Arno Oosthuysen,Abraham W. Steenkamp,Hermann Oostuisen,Philippus Venter,John P. Gajewski,Yu Zhang,B. Franklin Pugh,Kateryna D. Makova,Anton Nekrutenko,Elaine R. Mardis,Nick Patterson,Tom H. Pringle,Francesca Chiaromonte,James C. Mullikin,Evan E. Eichler,Ross C. Hardison,Richard A. Gibbs,Timothy T. Harkins,Vanessa M. Hayes +47 more
TL;DR: The extent of whole-genome and exome diversity among the five men, reporting 1.3 million novel DNA differences genome-wide, including 13,146 novel amino acid variants, suggests the Bushmen seem to be more different from each other than, for example, a European and an Asian.
Journal ArticleDOI
Circular RNA identification based on multiple seed matching.
TL;DR: An improved multithreading detection tool, CIRI2, which used an adapted maximum likelihood estimation based on multiple seed matching to identify back‐spliced junction reads and to filter false positives derived from repetitive sequences and mapping errors is proposed.