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Fangqing Zhao

Researcher at Chinese Academy of Sciences

Publications -  139
Citations -  10283

Fangqing Zhao is an academic researcher from Chinese Academy of Sciences. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 41, co-authored 129 publications receiving 7705 citations. Previous affiliations of Fangqing Zhao include Wenzhou Medical College & Peking Union Medical College.

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CIRI: an efficient and unbiased algorithm for de novo circular RNA identification.

TL;DR: A novel chiastic clipping signal-based algorithm, CIRI, is presented, to unbiasedly and accurately detect circRNAs from transcriptome data by employing multiple filtration strategies and to identify and experimentally validate the prevalence of intronic/intergenic circ RNAs as well as fragments specific to them in the human transcriptome.
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Metagenome-wide analysis of antibiotic resistance genes in a large cohort of human gut microbiota

TL;DR: It is found that Chinese individuals harbour the highest number and abundance of antibiotic resistance genes, followed by Danish and Spanish individuals, and single-nucleotide polymorphism-based analysis indicates that antibiotic resistant genes from the two European populations are more closely related while the Chinese ones are clustered separately.
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Circular RNA identification based on multiple seed matching.

TL;DR: An improved multithreading detection tool, CIRI2, which used an adapted maximum likelihood estimation based on multiple seed matching to identify back‐spliced junction reads and to filter false positives derived from repetitive sequences and mapping errors is proposed.