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Xushen Xiong
Researcher at Peking University
Publications - 15
Citations - 1698
Xushen Xiong is an academic researcher from Peking University. The author has contributed to research in topics: MRNA modification & Gene expression. The author has an hindex of 10, co-authored 15 publications receiving 1115 citations. Previous affiliations of Xushen Xiong include Boston Children's Hospital & Massachusetts Institute of Technology.
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Journal ArticleDOI
Transcriptome-wide mapping reveals reversible and dynamic N1-methyladenosine methylome
TL;DR: It is shown that m( 1)A is prevalent in Homo sapiens mRNA, which shows an m(1)A/A ratio of ∼0.02%, and it is shownthat m(2)A in mRNA is reversible by ALKBH3, a known DNA/RNA demethylase.
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Epitranscriptome sequencing technologies: decoding RNA modifications
TL;DR: This Review focuses on the major mRNA modifications in the transcriptome of eukaryotic cells: N6-methyladenosine, N6, 2′-O-dimethyladenosines, 5-methylcytidine, 5.hydroxylmethylcyTidine, inosine, pseudouridine and N1-methyl adenosine.
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Base-Resolution Mapping Reveals Distinct m1A Methylome in Nuclear- and Mitochondrial-Encoded Transcripts
Xiaoyu Li,Xushen Xiong,Meiling Zhang,Kun Wang,Ying Chen,Jun Zhou,Yuanhui Mao,Jia Lv,Danyang Yi,Xiao Wei Chen,Chu Wang,Shu-Bing Qian,Chengqi Yi +12 more
TL;DR: A base-resolution m1A profiling method is developed, based onm1A-induced misincorporation during reverse transcription, and distinct classes of m1 a methylome are revealed in the human transcriptome, providing a resource for functional studies of m 1A-mediated epitranscriptomic regulation.
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Transcription factor and microRNA co-regulatory loops: important regulatory motifs in biological processes and diseases
TL;DR: The types of FFLs and FBLs and their identified methods are summarized and the behaviors and functions for the experimentally identified loops according to biological processes and diseases are reviewed.
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Landscape and Regulation of m6A and m6Am Methylome across Human and Mouse Tissues
Jun’e Liu,Kai Li,Jia-Bin Cai,Jia-Bin Cai,Mingchang Zhang,Xiaoting Zhang,Xushen Xiong,Haowei Meng,Xizhan Xu,Zhibin Huang,Jinying Peng,Jia Fan,Jia Fan,Chengqi Yi +13 more
TL;DR: The m6A and m6Am methylome is reported through profiling of 43 human and 16 mouse tissues and demonstrates strongest tissue specificity for the brain tissues and cross-species analysis revealed that species rather than tissue type is the primary determinant of methylation.