Y
Yuan Shi
Researcher at Harvard University
Publications - 7
Citations - 1258
Yuan Shi is an academic researcher from Harvard University. The author has contributed to research in topics: Proteasome & Ubiquitin. The author has an hindex of 6, co-authored 7 publications receiving 1060 citations.
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Journal ArticleDOI
Proteasome subunit Rpn13 is a novel ubiquitin receptor
Koraljka Husnjak,Suzanne Elsasser,Naixia Zhang,Xiang Chen,Leah Randles,Yuan Shi,Kay Hofmann,Kylie J. Walters,Daniel Finley,Ivan Dikic,Ivan Dikic +10 more
TL;DR: The identification of a new ubiquitin receptor, Rpn13/ARM1, a known component of the proteasome, is reported, suggesting a coupling of chain recognition and disassembly at the prote asome.
Journal ArticleDOI
Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome
Yuan Shi,Xiang Chen,Suzanne Elsasser,Bradley B. Stocks,Geng Tian,Byung-Hoon Lee,Yanhong Shi,Naixia Zhang,Stefanie A. H. de Poot,Fabian Tuebing,Shuangwu Sun,Jacob Vannoy,Sergey G. Tarasov,John R. Engen,Daniel Finley,Kylie J. Walters +15 more
TL;DR: The results indicate that proteasome subunit Rpn1 can recognize both ubiquitin and UBL domains of substrate shuttling factors that themselves bind ubiquit in and function as reversibly associated proteasomal Ubiquitin receptors.
Journal ArticleDOI
USP14 deubiquitinates proteasome-bound substrates that are ubiquitinated at multiple sites
Byung-Hoon Lee,Ying Lu,Miguel A. Prado,Yuan Shi,Geng Tian,Shuangwu Sun,Shuangwu Sun,Suzanne Elsasser,Steven P. Gygi,Randall W. King,Daniel Finley +10 more
TL;DR: The specificity of the proteasome can be regulated by rapid Ubiquitin chain removal, which resolves substrates based on a novel aspect of ubiquitin conjugate architecture.
Journal ArticleDOI
UBE2O remodels the proteome during terminal erythroid differentiation
Anthony T. Nguyen,Miguel A. Prado,Paul J. Schmidt,Anoop K. Sendamarai,Joshua T. Wilson-Grady,Mingwei Min,Dean R. Campagna,Geng Tian,Yuan Shi,Verena Dederer,Mona Kawan,Nathalie Kuehnle,Joao A. Paulo,Yu Yao,Mitchell J. Weiss,Monica J. Justice,Steven P. Gygi,Mark D. Fleming,Daniel Finley +18 more
TL;DR: Results indicate that UBE2O may function as a hybrid enzyme with both E2 and E3 (ubiquitin-ligating) activities in the reticulocyte–red blood cell transition, and that a major component of the specificity underlying differentiation-linked proteome remodeling appears to be carried by UBE1O itself.
Journal ArticleDOI
The proteasome 19S cap and its ubiquitin receptors provide a versatile recognition platform for substrates
Kirby Martinez-Fonts,Caroline Davis,Takuya Tomita,Suzanne Elsasser,Andrew R. Nager,Yuan Shi,Daniel Finley,Andreas T Matouschek +7 more
TL;DR: It is reported that proteins with single chains of K48-linked ubiquitin are targeted for degradation almost exclusively through binding to Rpn10, and those targeted to the proteasome through a ubiquitIn-like domain are degraded most efficiently when bound by Rpn13 or Rpn1.