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Yujia Alina Chan
Researcher at Broad Institute
Publications - 24
Citations - 1251
Yujia Alina Chan is an academic researcher from Broad Institute. The author has contributed to research in topics: Gene & Genome instability. The author has an hindex of 12, co-authored 20 publications receiving 846 citations. Previous affiliations of Yujia Alina Chan include Harvard University & University of British Columbia.
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Journal ArticleDOI
R-loop-mediated genome instability in mRNA cleavage and polyadenylation mutants
Peter C. Stirling,Yujia Alina Chan,Sean W. Minaker,Maria J. Aristizabal,I. J. Barrett,Payal Sipahimalani,Michael S. Kobor,Philip Hieter +7 more
TL;DR: It is found that truncation fusions of yeast FIP1 analogous to those in cancer cause loss of function and that siRNA knockdown of FIP 1L1 in human cells increases DNA damage and chromosome breakage.
Journal ArticleDOI
Genome-wide profiling of yeast DNA:RNA hybrid prone sites with DRIP-chip.
Yujia Alina Chan,Maria J. Aristizabal,Phoebe Y. T. Lu,Zongli Luo,Akil Hamza,Michael S. Kobor,Peter C. Stirling,Philip Hieter +7 more
TL;DR: The genome-wide distribution of DNA:RNA hybrid prone loci in Saccharomyces cerevisiae is described by DNA: RNA immunoprecipitation (DRIP) followed by hybridization on tiling microarray, showing that DNA:RNAs hybrids preferentially accumulated at rDNA, Ty1 and Ty2 transposons, telomeric repeat regions and a subset of open reading frames (ORFs).
Journal ArticleDOI
From Structure to Systems: High-Resolution, Quantitative Genetic Analysis of RNA Polymerase II
Hannes Braberg,Huiyan Jin,Erica A. Moehle,Yujia Alina Chan,Shuyi Wang,Shuyi Wang,Michael Shales,Michael Shales,Joris J. Benschop,John H. Morris,Chenxi Qiu,Fuqu Hu,Leung K. Tang,James S. Fraser,James S. Fraser,Frank C. P. Holstege,Philip Hieter,Christine Guthrie,Craig D. Kaplan,Nevan J. Krogan,Nevan J. Krogan,Nevan J. Krogan +21 more
TL;DR: The pE-MAP approach provides a powerful strategy to understand other multifunctional machines at amino acid resolution and suggests that transcription rate is tuned to regulate multiple gene expression steps.
Journal ArticleDOI
Delivering genes across the blood-brain barrier: LY6A, a novel cellular receptor for AAV-PHP.B capsids.
Qin Huang,Ken Y. Chan,Isabelle G. Tobey,Yujia Alina Chan,Tim Poterba,Christine L. Boutros,Alejandro B. Balazs,Richard Daneman,Jonathan M. Bloom,Cotton Seed,Benjamin E. Deverman +10 more
TL;DR: It is demonstrated that this newly discovered mode of AAV binding and transduction can occur independently of other known AAV receptors, and inform ongoing efforts to develop next-generation AAV vehicles for human CNS gene therapy.
Journal ArticleDOI
Mechanisms of genome instability induced by RNA-processing defects.
TL;DR: How RNA-processing defects could destabilize genomes through mutagenic R-loop structures and by altering expression of genes required for genome stability are discussed.