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Complete artifact removal for EEG recorded during continuous fMRI using independent component analysis.

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TLDR
A comprehensive method based on independent component analysis (ICA) for simultaneously removing BCG and ocular artifacts from the EEG recordings, as well as residual MRI contamination left by AAS, which performs significantly better than the AAS method in removing the BCG artifact.
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This article is published in NeuroImage.The article was published on 2007-01-15 and is currently open access. It has received 226 citations till now. The article focuses on the topics: Artifact (error) & Electroencephalography.

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Citations
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Journal ArticleDOI

Electrophysiological signatures of resting state networks in the human brain.

TL;DR: This work has identified six widely distributed resting state networks and supports for the first time in humans the coalescence of several brain rhythms within large-scale brain networks as suggested by biophysical studies.
Journal ArticleDOI

A practical guide to the selection of independent components of the electroencephalogram for artifact correction

TL;DR: SASICA is a didactic tool that allows users to quickly understand what signal features captured by ICs make them likely to reflect artifacts, and constitutes a helpful guide for human users for making final decisions.
Journal ArticleDOI

EEG-vigilance and BOLD effect during simultaneous EEG/fMRI measurement

TL;DR: It seems important to pay attention to vigilance switches in order to separate vigilance associated BOLD signal changes from those specifically related to cognition for cognitive fMRI-research.
Journal ArticleDOI

BOLD correlates of EEG alpha phase-locking and the fMRI default mode network.

TL;DR: The results confirm the hypothesis that specific RSNs are organized by long-range synchronization at least in the alpha frequency band and claim that not only the spectral dynamics of EEG are important, but also their spatio-temporal organization.
References
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Journal ArticleDOI

EEGLAB: an open source toolbox for analysis of single-trial EEG dynamics including independent component analysis.

TL;DR: EELAB as mentioned in this paper is a toolbox and graphic user interface for processing collections of single-trial and/or averaged EEG data of any number of channels, including EEG data, channel and event information importing, data visualization (scrolling, scalp map and dipole model plotting, plus multi-trial ERP-image plots), preprocessing (including artifact rejection, filtering, epoch selection, and averaging), Independent Component Analysis (ICA) and time/frequency decomposition including channel and component cross-coherence supported by bootstrap statistical methods based on data resampling.
Journal ArticleDOI

Independent component analysis, a new concept?

Pierre Comon
- 01 Apr 1994 - 
TL;DR: An efficient algorithm is proposed, which allows the computation of the ICA of a data matrix within a polynomial time and may actually be seen as an extension of the principal component analysis (PCA).
Book

Independent Component Analysis

TL;DR: Independent component analysis as mentioned in this paper is a statistical generative model based on sparse coding, which is basically a proper probabilistic formulation of the ideas underpinning sparse coding and can be interpreted as providing a Bayesian prior.
Journal ArticleDOI

Fast and robust fixed-point algorithms for independent component analysis

TL;DR: Using maximum entropy approximations of differential entropy, a family of new contrast (objective) functions for ICA enable both the estimation of the whole decomposition by minimizing mutual information, and estimation of individual independent components as projection pursuit directions.
Journal ArticleDOI

A fast fixed-point algorithm for independent component analysis

TL;DR: A novel fast algorithm for independent component analysis is introduced, which can be used for blind source separation and feature extraction, and the convergence speed is shown to be cubic.
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Frequently Asked Questions (14)
Q1. What contributions have the authors mentioned in the paper "Complete artifact removal for eeg recorded during continuous fmri using independent component analysis" ?

In this work, the authors present a comprehensive method based on independent component analysis ( ICA ) for simultaneously removing BCG and ocular artifacts from the EEG recordings, as well as residual MRI contamination left by AAS. The ICA method has been tested on event-related potentials ( ERPs ) obtained from a visual oddball paradigm: it is very effective in attenuating artifacts in order to reconstruct clear brain signals from EEG acquired in the MRI scanner. Furthermore, since ocular artifacts can be completely suppressed, a larger number of trials is available for analysis. 

Three to six BCG components can be expected after ICA processing, whereas one or two ICs related to both ocular and imaging artifacts are generally separated. 

The authors used seven EEG datasets acquired during fMRI scanning (right-handed healthy subjects, age 19–24 years) for the validation of the proposed method. 

Among them, imaging and BCG artifacts are produced by the MRI environment, whereas ocular artifacts can also be found if the acquisition is performed out of the MRI scanner. 

3.For the BCG artifact components, the correlation values with the ECG signal ranged between 0.25 and 0.47 (p<0.001); conversely, the remaining ICs showed correlations lower than 0.07 (p<0.001). 

Given the characteristics of eye movements, which are fast and occur randomly, the ability of ICA to remove ocular artifacts wastested by setting an amplitude threshold to the EEG recordings: all epochs with amplitude larger than 80 μV were assumed to contain this kind of artifacts and were considered not to be useful for further analysis. 

The most popular processing technique for the attenuation of imaging artifact is averaged artifact subtraction (AAS) (Allen et al., 1998; Allen et al., 2000). 

For each subject, noise amplitude in the 100 ms prestimulus baseline after preprocessing, as well after ICA-based artifact removal and standard artifact removal, is shown for rare and frequent events respectively. 

An interesting alternative technique for the elimination of BCG artifacts is the independent component analysis (ICA), which has proved to perform better than AAS, because it makes no assumptions about the shape of the source signals and does not require the use of a reference signal (Srivastava et al., 2005). 

In general, there are three main kinds of disturbances that could contaminate the EEG signal changes associated to cerebral activity and that should be removed from the recordings before further analysis: imaging, BCG and ocular artifacts. 

The second approach was based on the use of reference signals, such as the ECG and EOG recordings (whenever available), and the estimate of the imaging artifact: the occurrence of a large correlation value between the single IC and one of these reference signals indicated that the source signal had to be considered as an artifact. 

A remarkable result is that the ICA method performs better than the AAS method for the cancellation of the BCG artifact: AAS relies on averaged artifact subtraction and is affected by the variability in BCG artifact wave morphology and duration; conversely, ICA is able to isolate the BCG artifact components simply on the basis of their statistical independence from those produced by other neural signal generators and other artifact sources. 

The noise amplitude in ERPs was calculated as the average root mean square (RMS) of the signal corresponding to the prestimulus interval. 

The disturbances were subtracted from the preprocessed recordings with appropriate weights for each channel; the result of the artifact removal is shown in Fig.