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Journal ArticleDOI

Counterion-induced condesation of deoxyribonucleic acid. a light-scattering study.

Robert W. Wilson, +1 more
- 29 May 1979 - 
- Vol. 18, Iss: 11, pp 2192-2196
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TLDR
Using Manning's (1978) counterion condensation theory, a striking unity among these disparate ions is calculated: the collapse occurs in each case when from 89 to 90% of the DNA phosphate charges are neutralized by condensed counterions.
Abstract
The addition of the trivalent or tetravalent cations spermidine or spermine to a solution of T7 DNA in aqueous solution causes an alteration of the DNA from its extended coil form to a condensed form. If performed at low DNA concentration and at low ionic strengths, this transformation results in a monomolecular collapse to form a particle with a hydrodynamic radius of about 500 A. We have monitored this change using quasielastic and total intensity light scattering. In a solution of 50% methanol in water, the divalent cations Mg2+ and putrescine also can cause the condensation of DNA. Using Manning's (1978) counterion condensation theory, we calculate a striking unity among these disparate ions: the collapse occurs in each case when from 89 to 90% of the DNA phosphate charges are neutralized by condensed counterions.

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Citations
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Journal ArticleDOI

DNA condensation by multivalent cations.

TL;DR: The statistical mechanics of the collapse of stiff polymers are summarized, which shows why DNA condensation is abrupt and why toroids are favored structures.
Journal ArticleDOI

Ionic effects on the elasticity of single DNA molecules

TL;DR: A retractile force appears in the presence of multivalent cations at molecular extensions that allow intramolecular contacts, suggesting condensation in stretched DNA occurs by a "thermal ratchet" mechanism.
Journal ArticleDOI

Effects of methylation on a synthetic polynucleotide: the B--Z transition in poly(dG-m5dC).poly(dG-m5dC).

TL;DR: The results suggest that the sequence m5dC-dG, which occurs in eukaryotic DNA, can have a disproportionately large effect on the B--Z transition.
Journal ArticleDOI

Deinococcus radiodurans - the consummate survivor.

TL;DR: It seems that D. radiodurans uses mechanisms that limit DNA degradation and that restrict the diffusion of DNA fragments that are produced following irradiation, to preserve genetic integrity.
Journal ArticleDOI

Condensation of DNA by multivalent cations: considerations on mechanism.

TL;DR: It appears that the size distribution of condensed particles is determined kinetically rather than thermodynamically, and that slow condensation kinetics may be required to overcome the high activation energy of highly distorted DNA bends or kinks at the turning points of rods.
References
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Journal ArticleDOI

The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides.

TL;DR: An analogous situation existed in the field of protein chemistry during the period after the formulation and confirmation of the Debye—Huckel theory of ionic solutions but before Scatchard's incorporation of the theory into his analysis of the binding properties of proteins.
Journal ArticleDOI

Analysis of Macromolecular Polydispersity in Intensity Correlation Spectroscopy: The Method of Cumulants

TL;DR: The first order electric field correlation function of laser light scattered by polydisperse solutions of macromolecules can be written as a sum or distribution of exponentials, with decay rates proportional to the diffusion coefficients of the solute molecules as discussed by the authors.
Journal ArticleDOI

The role of polyamines in the neutralization of bacteriophage deoxyribonucleic acid.

TL;DR: The cations of T4 phage have been examined and a balance has been obtained between total cations and total DNA anions and the replacement of the normal polyamines suggested that the polyamines may be acting as nonspecific cations.
Journal ArticleDOI

Compact form of DNA induced by spermidine.

TL;DR: This work has shown that in the assembly of T7 for example1, heads containing the products of genes 8–10 and 14–16 are apparently formed first, and that at least two other gene products which play no direct structural role are required for the maturation of the heads.
Journal ArticleDOI

The genetics and physiology of bacteriophage T7

TL;DR: It appears that in T7 (as in T4 and lambda) related functions tend to cluster along the genetic map, which makes this system a very attractive one in which to study a number of biological problems at the molecular level.
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