scispace - formally typeset
Open AccessJournal ArticleDOI

Gordonia desulfuricans sp. nov., a benzothiophene-desulphurizing actinomycete.

TLDR
The taxonomic position of two actinomycetes isolated from soil was established using a polyphasic approach and combined genotypic and phenotypic data show that strains 213ET and 213F merit recognition as a new species of Gordonia.
Abstract
The taxonomic position of two actinomycetes isolated from soil was established using a polyphasic approach. The organisms, designated 213ET and 213F, were found to have chemical and morphological properties consistent with their assignment to the genus Gordonia. Nearly complete sequences of the 16S rDNA genes of the two strains were determined following the isolation and direct sequencing of the amplified genes. The tested strains were found to have identical 16S rDNA sequences and formed a phylogenetic line within the evolutionary radiation occupied by the genus Gordonia that was most closely related to Gordonia rubropertincta DSM 43197T. However, DNA-DNA relatedness data showed that strain 213ET and Gordonia rubropertincta DSM 43197T belonged to distinct genomic species. Strains 213ET and 213F also shared an identical phenotypic profile which distinguished them from representatives of validly described Gordonia species. The combined genotypic and phenotypic data show that strains 213ET and 213F merit recognition as a new species of Gordonia. The name proposed for the new species is Gordonia desulfuricans, for which the type strain is 213ET (= NCIMB 40816T).

read more

Content maybe subject to copyright    Report

Citations
More filters
Journal ArticleDOI

Search and Discovery Strategies for Biotechnology: the Paradigm Shift

TL;DR: This review examines the paradigm shift from traditional biology to bioinformatics that is revolutionizing exploitable biology and reinforces the view that innovative microbiology is essential for releasing the potential of microbial diversity for biotechnology penetration throughout industry.
Journal ArticleDOI

Genome-Based Taxonomic Classification of the Phylum Actinobacteria

TL;DR: Good congruence was found between the discontinuous distribution of phenotypic properties and taxa delineated in the phylogenetic trees though diverse non-monophyletic taxa appeared to be based on the use of plesiomorphic character states as diagnostic features, underline the pitfalls inherent in phylogenies based upon single gene sequences.
Journal ArticleDOI

Salinispora arenicola gen. nov., sp. nov. and Salinispora tropica sp. nov., obligate marine actinomycetes belonging to the family Micromonosporaceae.

TL;DR: A taxonomic study was carried out to clarify the taxonomy of representatives of a group of marine actinomycetes previously designated MAR 1 and considered to belong to the family Micromonosporaceae, which contains two species recognized using a range of genotypic and phenotypic criteria.
Journal ArticleDOI

Biology of the Metabolically Diverse Genus Gordonia

TL;DR: The actinomycete genus Gordonia has attracted much interest in recent years for a variety of reasons, most species were isolated due to their abilities to degrade xenobiotics, environmental pollutants, or otherwise slowly biodegradable natural polymers as well as to transform or synthesize possibly.
Journal ArticleDOI

Gordonia amicalis sp. nov., a novel dibenzothiophene-desulphurizing actinomycete.

TL;DR: The taxonomic position of a dibenzothiophene-desulphurizing soil actinomycete was established using a polyphasic taxonomic approach and the tested strain, strain IEGMT, was shown to have chemical and morphological properties typical of members of the genus Gordonia.
References
More filters
Journal ArticleDOI

The neighbor-joining method: a new method for reconstructing phylogenetic trees.

TL;DR: The neighbor-joining method and Sattath and Tversky's method are shown to be generally better than the other methods for reconstructing phylogenetic trees from evolutionary distance data.
Journal ArticleDOI

Confidence limits on phylogenies: an approach using the bootstrap.

TL;DR: The recently‐developed statistical method known as the “bootstrap” can be used to place confidence intervals on phylogenies and shows significant evidence for a group if it is defined by three or more characters.
Journal ArticleDOI

Evolutionary trees from DNA sequences: A maximum likelihood approach

TL;DR: A computationally feasible method for finding such maximum likelihood estimates is developed, and a computer program is available that allows the testing of hypotheses about the constancy of evolutionary rates by likelihood ratio tests.
Related Papers (5)