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Journal ArticleDOI

Ribosomal Synthesis of Peptides with Multiple β-Amino Acids.

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TLDR
By using the Escherichia coli reconstituted cell-free translation system with a reprogramed genetic code, β-amino acids that give high single incorporation efficiency are screened and used to synthesize peptides containing multiple β-AMino acids.
Abstract
The compatibility of β-amino acids with ribosomal translation was studied for decades, but it has been still unclear whether the ribosome can accept various β-amino acids, and whether the ribosome can introduce multiple β-amino acids in a peptide. In the present study, by using the Escherichia coli reconstituted cell-free translation system with a reprogramed genetic code, we screened β-amino acids that give high single incorporation efficiency and used them to synthesize peptides containing multiple β-amino acids. The experiments of single β-amino acid incorporation into a peptide revealed that 13 β-amino acids are compatible with ribosomal translation. Six of the tested β-amino acids (βhGly, l-βhAla, l-βhGln, l-βhPhg, l-βhMet, and d-βhPhg) showed high incorporation efficiencies, and seven (l-βhLeu, l-βhIle, l-βhAsn, l-βhPhe, l-βhLys, d-βhAla, and d-βhLeu) showed moderate incorporation efficiencies; whereas no full-length peptide was produced using other β-amino acids (l-βhPro, l-βhTrp, and l-βhGlu). Sub...

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Citations
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Defining the Field of Sequence-Controlled Polymers.

TL;DR: All synthetic approaches that have been reported for the synthesis of SCPs are discussed and categorized, and the characterization tools, properties, and potential applications of these new polymers are described herein.
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RNA Display Methods for the Discovery of Bioactive Macrocycles

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In Vivo Biosynthesis of a β-Amino Acid-Containing Protein

TL;DR: The results reveal the unexpected tolerance of E. coli and its translation machinery to the β(3)-amino acid backbone and should embolden in vivo selections for orthogonal translational machinery components that incorporate diverse β-amino acids into proteins and peptides.
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Upgrading aminoacyl-tRNA synthetases for genetic code expansion.

TL;DR: The progress and challenges in developing more selective and efficient aminoacyl-tRNA synthetases for genetic code expansion are summarized.
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Trends in peptide drug discovery

TL;DR: The early efforts focused on human hormones, elegant medicinal chemistry and rational design strategies, peptide drugs derived from nature, and major breakthroughs in molecular biology and peptide chemistry continue to advance the field as mentioned in this paper.
References
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Journal ArticleDOI

Cell-free translation reconstituted with purified components

TL;DR: A protein-synthesizing system reconstituted from recombinant tagged protein factors purified to homogeneity was developed, and omission of a release factor allowed efficient incorporation of an unnatural amino acid using suppressor transfer RNA (tRNA).
Journal ArticleDOI

RNA-peptide fusions for the in vitro selection of peptides and proteins

TL;DR: Fusions between a synthetic mRNA and its encoded myc epitope peptide have been enriched from a pool of random sequence mRNA-peptide fusions by immunoprecipitation and should provide an additional route to the in vitro selection and directed evolution of proteins.
Journal ArticleDOI

A general method for site-specific incorporation of unnatural amino acids into proteins.

TL;DR: The ability to selectively replace amino acids in a protein with a wide variety of structural and electronic variants should provide a more detailed understanding of protein structure and function.
Journal ArticleDOI

In vitro virus: bonding of mRNA bearing puromycin at the 3'-terminal end to the C-terminal end of its encoded protein on the ribosome in vitro.

TL;DR: Construction of ‘in vitro virus’ was carried out in which a genotype molecule covalently binds to the phenotype molecule (protein) through puromycin on the ribosome in a cell‐free translation system, indicating a population of the in vitro virus to have ∼1012 protein variants.
Journal ArticleDOI

A highly flexible tRNA acylation method for non-natural polypeptide synthesis.

TL;DR: A de novo tRNA acylation system, the flexizyme (Fx) system, for the preparation of acyl tRNAs with nearly unlimited selection of amino and hydroxy acids and t RNAs and the combination of the Fx system with an appropriate cell-free translation system allows us to readily perform mRNA-encoded synthesis of proteins and short polypeptides involving multiple non-natural amino acids.
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How many amino acids are in C peptide?

The experiments of single β-amino acid incorporation into a peptide revealed that 13 β-amino acids are compatible with ribosomal translation.