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Craig T. Michell
Researcher at University of Eastern Finland
Publications - 39
Citations - 2324
Craig T. Michell is an academic researcher from University of Eastern Finland. The author has contributed to research in topics: DNA methylation & Epigenetics. The author has an hindex of 18, co-authored 34 publications receiving 1608 citations. Previous affiliations of Craig T. Michell include King Abdullah University of Science and Technology.
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Journal ArticleDOI
The genome of Chenopodium quinoa
David Erwin Jarvis,Yung Shwen Ho,Damien J. Lightfoot,Sandra M. Schmöckel,Bo Li,Theo Borm,Hajime Ohyanagi,Katsuhiko Mineta,Craig T. Michell,Noha Saber,Najeh M. Kharbatia,Ryan R. Rupper,Aaron R. Sharp,Nadine Dally,Berin A. Boughton,Yong H. Woo,Ge Gao,Elio Schijlen,Xiujie Guo,Afaque Ahmad Imtiyaz Momin,Sónia Negrão,Salim Al-Babili,Christoph A Gehring,Ute Roessner,Christian Jung,Kevin Murphy,Stefan T. Arold,Takashi Gojobori,C. Gerard van der Linden,Eibertus N. van Loo,Eric N. Jellen,Peter J. Maughan,Mark Tester +32 more
TL;DR: The assembly of a high-quality, chromosome-scale reference genome sequence for quinoa was produced using single-molecule real-time sequencing in combination with optical, chromosomes-contact and genetic maps, which facilitated the identification of the transcription factor likely to control the production of anti-nutritional triterpenoid saponins found in quinoa seeds.
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The genome of Aiptasia, a sea anemone model for coral symbiosis
Sebastian Baumgarten,Oleg Simakov,Lisl Y. Esherick,Yi Jin Liew,Erik M. Lehnert,Craig T. Michell,Yong Li,Elizabeth A. Hambleton,Annika Guse,Matt E. Oates,Julian Gough,Virginia M. Weis,Manuel Aranda,John R. Pringle,Christian R. Voolstra +14 more
TL;DR: The assembly and analysis of the Aiptasia genome is reported on, which will provide a foundation for future studies and has revealed several features that may be key to understanding the evolution and function of the endosymbiosis.
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Differential specificity between closely related corals and abundant Endozoicomonas endosymbionts across global scales.
Matthew J. Neave,Rita Rachmawati,Liping Xun,Craig T. Michell,David G. Bourne,Amy Apprill,Christian R. Voolstra +6 more
TL;DR: This work demonstrates that both corals harbor Endozoicomonas bacteria as their prevalent symbiont, and contributes to the factors underlying microbiome specificity and adds detail to coral holobiont functioning.
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Endozoicomonas genomes reveal functional adaptation and plasticity in bacterial strains symbiotically associated with diverse marine hosts
TL;DR: Novel Endozoicomonas genomes generated from single cells and metagenomes obtained directly from the corals showed evidence for differential functional specificity and diversification, including genes for the production of amino acids, suggesting that different genotypes play disparate roles and have diversified in concert with their hosts.
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Epigenome-associated phenotypic acclimatization to ocean acidification in a reef-building coral
Yi Jin Liew,Didier Zoccola,Yong Li,Eric Tambutté,Alexander A. Venn,Craig T. Michell,Guoxin Cui,Eva S. Deutekom,Jaap A. Kaandorp,Christian R. Voolstra,Sylvain Forêt,Denis Allemand,Sylvie Tambutté,Manuel Aranda +13 more
TL;DR: Analysis of DNA methylation patterns of corals subjected to long-term pH stress showed widespread changes in pathways regulating cell cycle and body size, which suggest an epigenetic component in phenotypic acclimatization that provides corals with an additional mechanism to cope with environmental change.