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Ida Lindeman
Researcher at University of Oslo
Publications - 19
Citations - 688
Ida Lindeman is an academic researcher from University of Oslo. The author has contributed to research in topics: Antibody & IGHV@. The author has an hindex of 7, co-authored 16 publications receiving 359 citations. Previous affiliations of Ida Lindeman include Oslo University Hospital & University of California, San Francisco.
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Journal ArticleDOI
Single-Cell Transcriptomics of Regulatory T Cells Reveals Trajectories of Tissue Adaptation.
Ricardo J. Miragaia,Tomás Gomes,Agnieszka Chomka,Laura Jardine,Angela Riedel,Ahmed N. Hegazy,Ahmed N. Hegazy,Natasha Whibley,Andrea Tucci,Xi Chen,Ida Lindeman,Guy Emerton,Thomas Krausgruber,Thomas Krausgruber,Jacqueline D. Shields,Muzlifah Haniffa,Fiona Powrie,Fiona Powrie,Sarah A. Teichmann,Sarah A. Teichmann,Sarah A. Teichmann +20 more
TL;DR: It is shown that Treg cells segregate into subpopulations along a continuum of tissue adaptation and present conserved expression programs between homeostasis and disease and mouse and human.
Posted ContentDOI
Single cell transcriptomics of regulatory T cells reveals trajectories of tissue adaptation
Ricardo J. Miragaia,Tomás Gomes,Agnieszka Chomka,Laura Jardine,Angela Riedel,Ahmed N. Hegazy,Ida Lindeman,Guy Emerton,Thomas Krausgruber,Jacqueline D. Shields,Muzlifah Haniffa,Fiona Powrie,Sarah A. Teichmann +12 more
TL;DR: Single-cell RNA-seq was used to characterise CD4+ regulatory and memory T cells in mouse skin and colon, and reconstructed the mechanisms of cell migration and NLT adaption, identifying molecular signals mediating NLT Treg recruitment and tissue adaptation.
Journal ArticleDOI
Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping.
Moriah Gidoni,Omri Snir,Ayelet Peres,Pazit Polak,Ida Lindeman,Ivana Mikocziova,Vikas Kumar Sarna,Knut E.A. Lundin,Christopher Clouser,Francois Vigneault,Andrew M. Collins,Ludvig M. Sollid,Gur Yaari +12 more
TL;DR: This work proposes a robust novel method for determining VDJ haplotypes by adapting a Bayesian framework, and attest its broad application with a large, multi-individual dataset.
Journal ArticleDOI
BraCeR: B-cell-receptor reconstruction and clonality inference from single-cell RNA-seq.
Ida Lindeman,Ida Lindeman,Guy Emerton,Lira Mamanova,Omri Snir,Krzysztof Polanski,Shuo-Wang Qiao,Shuo-Wang Qiao,Ludvig M. Sollid,Ludvig M. Sollid,Sarah A. Teichmann,Michael J. T. Stubbington +11 more
TL;DR: BraCeR as discussed by the authors reconstructs full-length B-cell receptor sequences from single-cell RNA-sequencing (scRNA-seq) data, without having to perform additional targeted repertoire sequencing.
Journal ArticleDOI
Genetic analysis of Ikaros target genes and tumor suppressor function in BCR-ABL1+ pre-B ALL.
Hilde Schjerven,Etapong Fonabei Ayongaba,Etapong Fonabei Ayongaba,Ali Aghajanirefah,Jami McLaughlin,Donghui Cheng,Huimin Geng,Joseph R. Boyd,Linn M Eggesbø,Linn M Eggesbø,Ida Lindeman,Ida Lindeman,Jessica L. Heath,Eugene Park,Owen N. Witte,Stephen T. Smale,Seth Frietze,Markus Müschen +17 more
TL;DR: Interestingly, genetic depletion of different Ikaros targets, including CTNND1 and the early hematopoietic cell surface marker CD34, resulted in reduced leukemic growth and the results suggest that IkarOS mediates tumor suppressing function by enforcing proper developmental stage–specific expression of multiple genes through chromatin compaction at its target genes.