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Isaac Crespo
Researcher at Swiss Institute of Bioinformatics
Publications - 36
Citations - 943
Isaac Crespo is an academic researcher from Swiss Institute of Bioinformatics. The author has contributed to research in topics: Gene regulatory network & Immune system. The author has an hindex of 14, co-authored 32 publications receiving 747 citations. Previous affiliations of Isaac Crespo include Complutense University of Madrid & University of Lausanne.
Papers
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Journal ArticleDOI
Integrating Pathways of Parkinson's Disease in a Molecular Interaction Map
Kazuhiro Fujita,Marek Ostaszewski,Yukiko Matsuoka,Samik Ghosh,Enrico Glaab,Christophe Trefois,Isaac Crespo,Thanneer M. Perumal,Wiktor Jurkowski,Paul Antony,Nico J. Diederich,Nico J. Diederich,Manuel Buttini,Akihiko Kodama,Venkata P. Satagopam,Serge Eifes,Antonio del Sol,Reinhard Schneider,Hiroaki Kitano,Rudi Balling +19 more
TL;DR: A computationally tractable, comprehensive molecular interaction map of Parkinson's disease that integrates pathways implicated in PD pathogenesis such as synaptic and mitochondrial dysfunction, impaired protein degradation, alpha-synuclein pathobiology and neuroinflammation is introduced.
Journal ArticleDOI
A Novel Network Integrating a miRNA-203/SNAI1 Feedback Loop which Regulates Epithelial to Mesenchymal Transition
Michèle Moes,Antony Le Béchec,Isaac Crespo,Christina Laurini,Aliaksandr Halavatyi,Guillaume Vetter,Antonio del Sol,Evelyne Friederich +7 more
TL;DR: A novel EMT core network integrating two fundamental negative feedback loops, miR203/SNAI1 and miR200/ZEB is proposed that could function as a switch controlling epithelial cell plasticity during differentiation and cancer progression.
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Low Dose Radiotherapy Reverses Tumor Immune Desertification and Resistance to Immunotherapy.
Fernanda G. Herrera,Catherine Ronet,Maria Ochoa de Olza,David Barras,Isaac Crespo,Massimo Andreatta,Jesus Corria-Osorio,Aodrenn Spill,Fabrizio Benedetti,Raphael Genolet,Angela Orcurto,Martina Imbimbo,Eleonora Ghisoni,Blanca Navarro Rodrigo,Dominik Berthold,Apostolos Sarivalasis,Khalil Zaman,Rafael Duran,Clarisse Dromain,John O. Prior,Niklaus Schaefer,Jean Bourhis,G. Dimopoulou,Zoi Tsourti,Marius Messemaker,Thomas H. Smith,Sarah Warren,Periklis G. Foukas,Sylvie Rusakiewicz,Mikael J. Pittet,Stefan Zimmermann,Christine Sempoux,Urania Dafni,Alexandre Harari,Lana E. Kandalaft,Santiago J. Carmona,Denarda Dangaj Laniti,Melita Irving,George Coukos +38 more
TL;DR: In this paper, low-dose radiotherapy (LDRT) of murine tumors promotes T-cell infiltration and enables responsiveness to combinatorial immunotherapy in an interferon-dependent manner.
Journal ArticleDOI
Detecting cellular reprogramming determinants by differential stability analysis of gene regulatory networks.
TL;DR: A computational method, without any preliminary selection of candidate genes, to identify reduced subsets of genes, which when perturbed can induce transitions between cellular phenotypes, and represents a useful framework to assist researchers in the field of cellular reprogramming to design experimental strategies.
Journal ArticleDOI
A general strategy for cellular reprogramming: the importance of transcription factor cross-repression.
Isaac Crespo,Antonio del Sol +1 more
TL;DR: This work introduces a method that generalizes the concept of transcription factor cross‐repression to systematically predict sets of genes, whose perturbations induce cellular transitions between any given pair of cell types, and is the first method that systematically makes these predictions without prior knowledge of potential candidate genes and pathways involved.