J
Jean-Christophe Fillion-Robin
Researcher at Kitware
Publications - 25
Citations - 7991
Jean-Christophe Fillion-Robin is an academic researcher from Kitware. The author has contributed to research in topics: Computer science & Medicine. The author has an hindex of 9, co-authored 20 publications receiving 4718 citations.
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Journal ArticleDOI
3D Slicer as an image computing platform for the Quantitative Imaging Network.
Andriy Fedorov,Reinhard Beichel,Jayashree Kalpathy-Cramer,Julien Finet,Jean-Christophe Fillion-Robin,Sonia Pujol,Christian Bauer,Dominique Jennings,Fiona M. Fennessy,Milan Sonka,John M. Buatti,Stephen R. Aylward,James V. Miller,Steve Pieper,Ron Kikinis +14 more
TL;DR: An overview of 3D Slicer is presented as a platform for prototyping, development and evaluation of image analysis tools for clinical research applications and the utility of the platform in the scope of QIN is illustrated.
Journal ArticleDOI
Computational Radiomics System to Decode the Radiographic Phenotype
Joost J. M. van Griethuysen,Joost J. M. van Griethuysen,Joost J. M. van Griethuysen,Andriy Fedorov,Chintan Parmar,Ahmed Hosny,Nicole Aucoin,Vivek Narayan,Regina G. H. Beets-Tan,Regina G. H. Beets-Tan,Jean-Christophe Fillion-Robin,Steve Pieper,Hugo J.W.L. Aerts +12 more
TL;DR: PyRadiomics, a flexible open-source platform capable of extracting a large panel of engineered features from medical images, is developed and its application in characterizing lung lesions is demonstrated.
Journal ArticleDOI
Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience.
Tina Kapur,Steve Pieper,Andriy Fedorov,Jean-Christophe Fillion-Robin,Michael Halle,Lauren J. O'Donnell,Andras Lasso,Tamas Ungi,Csaba Pinter,Julien Finet,Sonia Pujol,Jayender Jagadeesan,Junichi Tokuda,Isaiah Norton,Raúl San José Estépar,David T. Gering,Hugo J.W.L. Aerts,Marianna Jakab,Nobuhiko Hata,Luiz Ibanez,Daniel J. Blezek,James H. Miller,Stephen R. Aylward,W. Eric L. Grimson,Gabor Fichtinger,William M. Wells,William E. Lorensen,William J. Schroeder,Ron Kikinis +28 more
TL;DR: What are gaps in the way medical image computing is pursued today; how a well-executed research platform can enable discovery, innovation and reproducible science ("Open Science"); and how the quest to build such a software platform has evolved into a productive and rewarding social engineering exercise in building an open-access community with a shared vision are discussed.
Posted ContentDOI
NWB:N 2.0: An Accessible Data Standard for Neurophysiology
Oliver Ruebel,Andrew Tritt,Benjamin Dichter,Thomas Braun,Nicholas Cain,Nathan G. Clack,Thomas J. Davidson,Max Dougherty,Jean-Christophe Fillion-Robin,Nile Graddis,Michael Grauer,Justin T. Kiggins,Lawrence Niu,Doruk Ozturk,William J. Schroeder,Ivan Soltesz,Friedrich T. Sommer,Karel Svoboda,Lydia Ng,Loren M. Frank,Kristofer E. Bouchard +20 more
TL;DR: This manuscript focuses in particular on the NWB:N data standard schema and present advances towards creating an accessible data standard for neurophysiology.
Journal ArticleDOI
dcmqi : An Open Source Library for Standardized Communication of Quantitative Image Analysis Results Using DICOM.
Christian Herz,Christian Herz,Jean-Christophe Fillion-Robin,Michael D. Onken,Jörg Riesmeier,Andras Lasso,Csaba Pinter,Gabor Fichtinger,Steve Pieper,David A. Clunie,Ron Kikinis,Andriy Fedorov,Andriy Fedorov +12 more
TL;DR: dcmqi (DICOM for Quantitative Imaging) is a free, open source library that implements conversion of the data stored in commonly used research formats into the standard DICOM representation.