K
Kazuyuki Shimizu
Researcher at Keio University
Publications - 157
Citations - 7542
Kazuyuki Shimizu is an academic researcher from Keio University. The author has contributed to research in topics: Metabolic flux analysis & Flux (metabolism). The author has an hindex of 49, co-authored 157 publications receiving 7105 citations. Previous affiliations of Kazuyuki Shimizu include Kyushu Institute of Technology.
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Multiple high-throughput analyses monitor the response of E. coli to perturbations.
Nobuyoshi Ishii,Kenji Nakahigashi,Tomoya Baba,Tomoya Baba,Martin Robert,Tomoyoshi Soga,Akio Kanai,Takashi Hirasawa,Miki Naba,Kenta Hirai,Aminul Hoque,Pei Yee Ho,Yuji Kakazu,Kaori Sugawara,Saori Igarashi,Satoshi Harada,Takeshi Masuda,Naoyuki Sugiyama,Takashi Togashi,Miki Hasegawa,Yuki Takai,Katsuyuki Yugi,Kazuharu Arakawa,Nayuta Iwata,Yoshihiro Toya,Yoichi Nakayama,Takaaki Nishioka,Takaaki Nishioka,Kazuyuki Shimizu,Kazuyuki Shimizu,Hirotada Mori,Hirotada Mori,Masaru Tomita +32 more
TL;DR: E. coli seems to use complementary strategies that result in a metabolic network robust against perturbations, and actively regulated enzyme levels to maintain a stable metabolic state in response to changes in growth rate.
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Energetics and carbon metabolism during growth of microalgal cells under photoautotrophic, mixotrophic and cyclic light-autotrophic/dark-heterotrophic conditions.
TL;DR: By evaluating the energy economy through the energy utilization efficiency, it was found that the biomass yield on the supplied energy was the lowest in the autotrophic cultivation, and the cyclic culture gave the most efficient utilization of energy for biomass production.
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Metabolic flux analysis in Synechocystis using isotope distribution from 13C-labeled glucose.
TL;DR: The analyzed result suggested that the activity of the respiratory electron transport chain in cyanobacterial cells was not inhibited by light, and revealed that the NADPH synthesis was in excess relative to its requirement, and the excess NADPH might be reoxidized in Cyanobacterial respiration to provide the energy for cellular requirement.
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Global metabolic regulation analysis for Escherichia coli K12 based on protein expression by 2-dimensional electrophoresis and enzyme activity measurement
TL;DR: Regulation of the main metabolic pathways of Escherichia coli K12 was investigated based on 2-dimensional electrophoresis (2DE) and the measurement of enzyme activities, and protein abundance obtained by 2DE correlated well with enzyme activity, with a few exceptions.
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Responses of the Central Metabolism in Escherichia coli to Phosphoglucose Isomerase and Glucose-6-Phosphate Dehydrogenase Knockouts
Qiang Hua,Chen Yang,Tomoya Baba,Hirotada Mori,Hirotada Mori,Kazuyuki Shimizu,Kazuyuki Shimizu +6 more
TL;DR: Although knockout of G6P dehydrogenase had no significant influence on the central metabolism under glucose-limited conditions, this mutation resulted in extensive overflow metabolism and extremely low tricarboxylic acid cycle fluxes under ammonia limitation conditions.