N
Naoyuki Sugiyama
Researcher at Kyoto University
Publications - 76
Citations - 5664
Naoyuki Sugiyama is an academic researcher from Kyoto University. The author has contributed to research in topics: Phosphorylation & Kinase. The author has an hindex of 30, co-authored 72 publications receiving 4829 citations. Previous affiliations of Naoyuki Sugiyama include University of Tokyo & Osaka Prefecture University.
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Journal ArticleDOI
Type 2C protein phosphatases directly regulate abscisic acid-activated protein kinases in Arabidopsis
Taishi Umezawa,Naoyuki Sugiyama,Masahide Mizoguchi,Shimpei Hayashi,Fumiyoshi Myouga,Kazuko Yamaguchi-Shinozaki,Yasushi Ishihama,Takashi Hirayama,Kazuo Shinozaki +8 more
TL;DR: It is demonstrated that group A PP2Cs act as ‘gatekeepers’ of subclass III SnRK2s, unraveling an important regulatory mechanism of ABA signaling.
Journal ArticleDOI
Multiple high-throughput analyses monitor the response of E. coli to perturbations.
Nobuyoshi Ishii,Kenji Nakahigashi,Tomoya Baba,Tomoya Baba,Martin Robert,Tomoyoshi Soga,Akio Kanai,Takashi Hirasawa,Miki Naba,Kenta Hirai,Aminul Hoque,Pei Yee Ho,Yuji Kakazu,Kaori Sugawara,Saori Igarashi,Satoshi Harada,Takeshi Masuda,Naoyuki Sugiyama,Takashi Togashi,Miki Hasegawa,Yuki Takai,Katsuyuki Yugi,Kazuharu Arakawa,Nayuta Iwata,Yoshihiro Toya,Yoichi Nakayama,Takaaki Nishioka,Takaaki Nishioka,Kazuyuki Shimizu,Kazuyuki Shimizu,Hirotada Mori,Hirotada Mori,Masaru Tomita +32 more
TL;DR: E. coli seems to use complementary strategies that result in a metabolic network robust against perturbations, and actively regulated enzyme levels to maintain a stable metabolic state in response to changes in growth rate.
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Phosphopeptide Enrichment by Aliphatic Hydroxy Acid-modified Metal Oxide Chromatography for Nano-LC-MS/MS in Proteomics Applications
Naoyuki Sugiyama,Takeshi Masuda,Kosaku Shinoda,Akihiro Nakamura,Masaru Tomita,Yasushi Ishihama,Yasushi Ishihama +6 more
TL;DR: This is the first successful application of a single MOC-based approach to phosphopeptide enrichment from complex biological samples such as cell lysates, and the combined results provided 1646 uniqueosphopeptides.
Journal ArticleDOI
Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis
Naoyuki Sugiyama,Hirofumi Nakagami,Keiichi Mochida,Arsalan Daudi,Masaru Tomita,Ken Shirasu,Yasushi Ishihama,Yasushi Ishihama +7 more
TL;DR: The proteome‐wide mapping of in vivo phosphorylation sites in Arabidopsis is reported by using complementary phosphopeptide enrichment techniques coupled with high‐accuracy mass spectrometry to highlight the extent and contribution of tyrosine phosphorylated proteins in plants.
Journal ArticleDOI
jPOSTrepo: an international standard data repository for proteomes.
Shujiro Okuda,Yu Watanabe,Yuki Moriya,Shin Kawano,Tadashi Yamamoto,Masaki Matsumoto,Tomoyo Takami,Daiki Kobayashi,Norie Araki,Akiyasu C. Yoshizawa,Tsuyoshi Tabata,Naoyuki Sugiyama,Susumu Goto,Yasushi Ishihama +13 more
TL;DR: JPOSTrepo (https://repository.jpostdb.org/) as mentioned in this paper is a large-scale proteomics data repository with high-speed file uploading, flexible file management and easy-to-use interfaces.