K
Kiyoko F. Aoki-Kinoshita
Researcher at Soka University of America
Publications - 123
Citations - 7159
Kiyoko F. Aoki-Kinoshita is an academic researcher from Soka University of America. The author has contributed to research in topics: Glycan & Glycomics. The author has an hindex of 30, co-authored 111 publications receiving 6123 citations. Previous affiliations of Kiyoko F. Aoki-Kinoshita include National Institute of Advanced Industrial Science and Technology & Hokkaido University.
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Journal ArticleDOI
From genomics to chemical genomics: new developments in KEGG
Minoru Kanehisa,Susumu Goto,Masahiro Hattori,Kiyoko F. Aoki-Kinoshita,Masumi Itoh,Shuichi Kawashima,Toshiaki Katayama,Michihiro Araki,Mika Hirakawa +8 more
TL;DR: The scope of KEGG LIGAND has been significantly expanded to cover both endogenous and exogenous molecules, and RPAIR contains curated chemical structure transformation patterns extracted from known enzymatic reactions, which would enable analysis of genome-environment interactions.
Journal ArticleDOI
Symbol Nomenclature for Graphical Representations of Glycans.
Ajit Varki,Richard D. Cummings,Markus Aebi,Packer Nh,Peter H. Seeberger,Jeffrey D. Esko,Pamela Stanley,Gerald W. Hart,Alan G. Darvill,Taroh Kinoshita,James J. Prestegard,Ronald L. Schnaar,Hudson H. Freeze,Jamey D. Marth,Carolyn R. Bertozzi,Marilynn E. Etzler,Martin Frank,Johannes F.G. Vliegenthart,Thomas Lütteke,Serge Pérez,Evan E Bolton,Pauline M. Rudd,James C. Paulson,Minoru Kanehisa,Philip V. Toukach,Kiyoko F. Aoki-Kinoshita,Anne Dell,Hisashi Narimatsu,William S. York,Naoyuki Taniguchi,Stuart Kornfeld +30 more
TL;DR: Author(s): Varki, Ajit; Cummings, Richard D; Aebi, Markus; Packer, Nicole H; Seeberger, Peter H; Esko, Jeffrey D; Stanley, Pamela; Hart, Gerald; Darvill, Alan; Kinoshita, Taroh; Prestegard, James J; Schnaar, Ronald L; Freeze, Hudson H; Marth, Jamey D; Bertozzi, Carolyn R.
Journal ArticleDOI
KEGG as a glycome informatics resource.
Kosuke Hashimoto,Susumu Goto,Shin Kawano,Kiyoko F. Aoki-Kinoshita,Nobuhisa Ueda,Masami Hamajima,Toshisuke Kawasaki,Minoru Kanehisa +7 more
TL;DR: A glycome informatics resource is developed in KEGG (Kyoto Encyclopedia of Genes and Genomes), an integrated knowledge base of protein networks, genomic information, and chemical information, which is able to display, for example, expression data of glycosyltransferases in a compact manner.
Book ChapterDOI
Gene annotation and pathway mapping in KEGG.
TL;DR: KEGG is a database resource that provides all knowledge about genomes and their relationships to biological systems such as cells and whole organisms as well as their interactions with the environment and its various tools for genomic analyses are introduced.
Journal ArticleDOI
Updates to the Symbol Nomenclature for Glycans guidelines.
Sriram Neelamegham,Kiyoko F. Aoki-Kinoshita,Evan E Bolton,Martin Frank,Frédérique Lisacek,Thomas Lütteke,Noel M. O'Boyle,Nicolle H. Packer,Pamela Stanley,Philip V. Toukach,Ajit Varki,Robert J. Woods +11 more
TL;DR: Several changes have been made to the SNFG page in the last year to update the rules for depicting glycans using theSNFG, to include more examples of use, particularly for non-mammalian organisms, and to provide guidelines for the depiction of ambiguous glycan structures.