M
Masaki Shirayama
Researcher at University of Massachusetts Medical School
Publications - 26
Citations - 3584
Masaki Shirayama is an academic researcher from University of Massachusetts Medical School. The author has contributed to research in topics: Argonaute & Piwi-interacting RNA. The author has an hindex of 21, co-authored 26 publications receiving 3088 citations. Previous affiliations of Masaki Shirayama include Max Planck Society & Howard Hughes Medical Institute.
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Journal ArticleDOI
piRNAs Initiate an Epigenetic Memory of Nonself RNA in the C. elegans Germline
Masaki Shirayama,Meetu Seth,Heng-Chi Lee,Weifeng Gu,Takao Ishidate,Darryl Conte,Craig C. Mello +6 more
TL;DR: It is shown that the Piwi Argonaute PRG-1 and its genomically encoded piRNA cofactors initiate permanent silencing, and maintenance depends on chromatin factors and the WAGOArgonaute pathway.
Journal ArticleDOI
Distinct argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline.
Weifeng Gu,Masaki Shirayama,Darryl Conte,Jessica J. Vasale,Pedro J. Batista,Julie M. Claycomb,James J. Moresco,Elaine M. Youngman,Jennifer Keys,Matthew J. Stoltz,Chun-Cheih G. Chen,Daniel A. Chaves,Daniel A. Chaves,Shenghua E. Duan,Krisitin D. Kasschau,Noah Fahlgren,John R. Yates,Shohei Mitani,James C. Carrington,Craig C. Mello,Craig C. Mello +20 more
TL;DR: Deep-sequencing and genetic approaches are combined to explore the biogenesis and function of endo-siRNAs in C. elegans and show that, in the germline, one system is dependent on worm-specific AGOs, including WAGO-1, which localizes to germline nuage structures called P granules.
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The Argonaute CSR-1 and Its 22G-RNA Cofactors Are Required for Holocentric Chromosome Segregation
Julie M. Claycomb,Pedro J. Batista,Ka Ming Pang,Weifeng Gu,Jessica J. Vasale,Josien C. van Wolfswinkel,Josien C. van Wolfswinkel,Daniel A. Chaves,Daniel A. Chaves,Masaki Shirayama,Shohei Mitani,René F. Ketting,Darryl Conte,Craig C. Mello,Craig C. Mello +14 more
TL;DR: These findings support a model in which CSR-1 complexes target protein-coding domains to promote their proper organization within the holocentric chromosomes of C. elegans.
Journal ArticleDOI
C. elegans piRNAs Mediate the Genome-wide Surveillance of Germline Transcripts
TL;DR: It is shown that PRG-1 is required to initiate, but not to maintain, silencing of transgenes engineered to contain complementarity to endogenous 21U-RNAs, a model in which C. elegans piRNAs utilize their enormous repertoire of targeting capacity to scan the germline transcriptome for foreign sequences, while endogenous germline-expressed genes are actively protected from piRNA-induced silencing.
Journal ArticleDOI
A Co-CRISPR Strategy for Efficient Genome Editing in Caenorhabditis elegans
Heesun Kim,Takao Ishidate,Krishna S. Ghanta,Meetu Seth,Darryl Conte,Masaki Shirayama,Craig C. Mello +6 more
TL;DR: These findings reveal a surprisingly high frequency of HR-mediated gene conversion, making it possible to rapidly and precisely edit the C. elegans genome both with and without the use of co-inserted marker genes.