N
Narayanan Eswar
Researcher at University of California, San Francisco
Publications - 36
Citations - 11501
Narayanan Eswar is an academic researcher from University of California, San Francisco. The author has contributed to research in topics: MODELLER & Structural genomics. The author has an hindex of 25, co-authored 34 publications receiving 10629 citations. Previous affiliations of Narayanan Eswar include DuPont & California Institute for Quantitative Biosciences.
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Journal ArticleDOI
Comparative Protein Structure Modeling Using MODELLER
Narayanan Eswar,Ben Webb,Marc A. Marti-Renom,Mallur S. Madhusudhan,David Eramian,Min-Yi Shen,Ursula Pieper,Andrej Sali +7 more
TL;DR: This unit describes how to calculate comparative models using the program MODELLER and discusses all four steps of comparative modeling, frequently observed errors, and some applications.
Journal ArticleDOI
Comparative protein structure modeling using Modeller.
Narayanan Eswar,Ben Webb,Marc A. Marti-Renom,Mallur S. Madhusudhan,David Eramian,Min-Yi Shen,Ursula Pieper,Andrej Sali +7 more
TL;DR: This unit describes how to calculate comparative models using the program MODELLER and discusses all four steps of comparative modeling, frequently observed errors, and some applications.
Journal ArticleDOI
MODBASE, a database of annotated comparative protein structure models, and associated resources
Ursula Pieper,Narayanan Eswar,Ben Webb,David Eramian,David Eramian,Libusha Kelly,Libusha Kelly,David T. Barkan,David T. Barkan,Hannah Carter,Parminder Mankoo,Rachel Karchin,Marc A. Marti-Renom,Fred P. Davis,Andrej Sali +14 more
TL;DR: A PSI:Biology initiative to maximize the structural coverage of the human alpha-helical transmembrane proteome and a determination of structural determinants of human immunodeficiency virus-1 protease specificity are highlighted.
Journal ArticleDOI
Structure of the 80S Ribosome from Saccharomyces cerevisiae—tRNA-Ribosome and Subunit-Subunit Interactions
Christian M. T. Spahn,Roland Beckmann,Roland Beckmann,Narayanan Eswar,Pawel A. Penczek,Andrej Sali,Günter Blobel,Joachim Frank,Joachim Frank,Joachim Frank +9 more
TL;DR: This analysis presents an exhaustive inventory of an eukaryotic ribosome at the molecular level, with mainly rRNA contributing to its molecular environment.
Journal ArticleDOI
Tools for comparative protein structure modeling and analysis
Narayanan Eswar,Bino John,Nebojsa Mirkovic,Andras Fiser,Valentin A. Ilyin,Ursula Pieper,Ashley C. Stuart,Marc A. Marti-Renom,Mallur S. Madhusudhan,Bozidar Yerkovich,Andrej Sali +10 more
TL;DR: The following resources for comparative protein structure modeling and analysis are described (http://salilab.org): MODELLER, a program for comparative modeling by satisfaction of spatial restraints, and MODWEB, a web server for automated comparative modeling that relies on PSI-BLAST, IMPALA and ModeLLER.