P
Pankaj Garg
Researcher at University of Toronto
Publications - 5
Citations - 390
Pankaj Garg is an academic researcher from University of Toronto. The author has contributed to research in topics: Ubiquitin & Deubiquitinating enzyme. The author has an hindex of 5, co-authored 5 publications receiving 331 citations.
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Journal ArticleDOI
A strategy for modulation of enzymes in the ubiquitin system.
Andreas Ernst,George V. Avvakumov,Jiefei Tong,Yihui Fan,Yanling Zhao,Philipp Alberts,Avinash Persaud,John R. Walker,Ana-Mirela Neculai,Dante Neculai,Andrew Vorobyov,Pankaj Garg,Linda G. Beatty,Pak-Kei Chan,Yu Chi Juang,Marie-Claude Landry,Christina Yeh,Christina Yeh,Elton Zeqiraj,Konstantina Karamboulas,Abdellah Allali-Hassani,Masoud Vedadi,Mike Tyers,Mike Tyers,Jason Moffat,Frank Sicheri,Frank Sicheri,Laurence Pelletier,Laurence Pelletier,Daniel Durocher,Daniel Durocher,Brian Raught,Daniela Rotin,Jianhua Yang,Michael Moran,Sirano Dhe-Paganon,Sirano Dhe-Paganon,Sachdev S. Sidhu +37 more
TL;DR: This work used massively diverse combinatorial libraries of ubiquitin variants to develop inhibitors of four deubiquitinases (DUBs) and analyzed the DUB-inhibitor complexes with crystallography to report a method to target the myriad enzymes that govern ubiquitination of protein substrates.
Journal ArticleDOI
E2 enzyme inhibition by stabilization of a low-affinity interface with ubiquitin
Hao Huang,Derek F. Ceccarelli,Stephen Orlicky,Daniel J. St-Cyr,Amy Ziemba,Pankaj Garg,Serge Plamondon,Manfred Auer,Sachdev S. Sidhu,Anne Marinier,Gary Kleiger,Mike Tyers,Frank Sicheri,Frank Sicheri +13 more
TL;DR: Stabilization of the numerous other weak interactions between ubiquitin and UPS enzymes by small molecules may be a feasible strategy to selectively inhibit different UPS activities.
Journal ArticleDOI
Proteomic peptide phage display uncovers novel interactions of the PDZ1-2 supramodule of syntenin
Sarah Garrido-Urbani,Pankaj Garg,Rania Ghossoub,Roland Arnold,Frédérique Lembo,Gustav N. Sundell,Philip M. Kim,Marc Lopez,Pascale Zimmermann,Pascale Zimmermann,Sachdev S. Sidhu,Ylva Ivarsson +11 more
TL;DR: The study demonstrates the power of ProP‐PD as a complementary approach to uncover interactions of potential biological relevance and profiles syntenin PDZ1‐2 through proteomic peptide phage display (ProP‐ PD) using a library that displays C‐terminal regions of the human proteome.
Journal ArticleDOI
Allosteric Modulation of Binding Specificity by Alternative Packing of Protein Cores
Moshe Ben-David,Haiming Huang,Mark G. F. Sun,Carles Corbi-Verge,Evangelia Petsalaki,Ke Liu,David Gfeller,Pankaj Garg,Wolfram Tempel,Irina Sochirca,Julia M. Shifman,Alan R. Davidson,Jinrong Min,Philip M. Kim,Sachdev S. Sidhu +14 more
TL;DR: The results show that alternative core packing and consequent allosteric modulation of binding interfaces could be used to engineer proteins with novel functions.
Journal ArticleDOI
Structural and Functional Analysis of Ubiquitin-based Inhibitors That Target the Backsides of E2 Enzymes
Pankaj Garg,Derek F. Ceccarelli,Alexander F.A. Keszei,Igor Kurinov,Frank Sicheri,Sachdev S. Sidhu +5 more
TL;DR: The findings validate the E2 backside as a target for inhibition and provide structural insights to aid inhibitor design and screening efforts.