P
Patrick Wincker
Researcher at Université Paris-Saclay
Publications - 417
Citations - 89088
Patrick Wincker is an academic researcher from Université Paris-Saclay. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 108, co-authored 366 publications receiving 77726 citations. Previous affiliations of Patrick Wincker include University of Évry Val d'Essonne & French Alternative Energies and Atomic Energy Commission.
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Journal ArticleDOI
Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor oceans revealed by a chromosome-scale genome sequence
Nina Guérin,Marta Ciccarella,Elisa Flamant,Paul Frémont,Sophie Mangenot,Benjamin Istace,Benjamin Noel,Caroline Belser,Laurie Bertrand,Karine Labadie,Corinne Cruaud,Sarah Romac,Charles Bachy,Martin Gachenot,Eric Pelletier,Adriana Alberti,Olivier Jaillon,Patrick Wincker,Jean-Marc Aury,Quentin Carradec +19 more
TL;DR: In this paper , the authors analyzed the relative abundance, ecological niche and potential for the adaptation in all oceans using a complete chromosome-scale assembled genome sequence and found that P. calceolata is one of the most abundant eukaryotic species in the oceans with a relative abundance favored by high temperature, low light and iron-poor conditions.
Posted ContentDOI
Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing
Caroline Belser,Franc-Christophe Baurens,Bernard Noël,Guillaume Martin,Corinne Cruaud,Benjamin Istace,Nabila Yahiaoui,Karine Labadie,E. Hribova,Jaroslav Dolezel,Arnaud Lemainque,Patrick Wincker,Angélique D'Hont,Jean-Marc Aury +13 more
TL;DR: In this paper, the authors reported a chromosome-scale assembly of a banana genome (Musa acuminata) generated using Oxford Nanopore long-reads and achieved genome coverage of 177X from a single PromethION flowcell with near 17X with reads longer than 75Kb.
A large est resource for Theobroma cacao including cDNAS isolated from various organs and under various biotic and abiotic stresses
Claire Lanaud,Olivier Fouet,Karina Peres Gramacho,Xavier Argout,Thierry Legavre,Xavier Sabau,Ange-Marie Risterucci,Patrick Wincker,Corinne Da Silva,Rey Gaston Loor,Uilson Vanderlei Lopes,Julio Cezar M. Cascardo,Brigitte Courtois,David N. Kuhn,Raymond J. Schnell,Bryan A. Bailey,Régis Babin,Olivier Sounigo,Michel Ducamp,Didier Paulin,Peninna Deberdt,Joseph A. Verica,Mark J. Guiltinan,Laurence Alemanno,Regina Machado,Wilbert Phillips,Fabienne Micheli,Abelmon da Silva Gesteira,Didier Clément,Siela N. Maximova,Michel Boccara,David R. Butler,Eric Rosenquist,Martin Gilmour,Jean-Christophe Glaszmann +34 more
TL;DR: Un projet international visant au sequencage d'une importante collection of 180 000 clones ADNc de cacao enrichis en pleine longueur, representant des genes exprimes dans T. cacao L. a ete realise.
Journal ArticleDOI
Comparative analysis of BAC and whole genome shotgun sequences from an Anopheles gambiae region related to Plasmodium encapsulation.
Karin Eiglmeier,Patrick Wincker,Laurence Cattolico,Véronique Anthouard,Inge Holm,Ralph Eckenberg,Hadi Quesneville,Olivier Jaillon,Frank H. Collins,Jean Weissenbach,Paul T. Brey,Charles Roth +11 more
TL;DR: Six bacterial artificial chromosome (BAC) clones from the Pen-1 region that is the major quantitative trait locus involved in Plasmodium encapsulation are selected and sequenced, providing evidence for the recent active transposition of these elements and demonstrating the plasticity of the Anopheles genome.
Posted ContentDOI
A framework for in situ molecular characterization of coral holobionts using nanopore sequencing
Quentin Carradec,Julie Poulain,Emilie Boissin,Benjamin C. C. Hume,Christian R. Voolstra,Christian R. Voolstra,Maren Ziegler,Stefan Engelen,Corinne Cruaud,Serge Planes,Patrick Wincker +10 more
TL;DR: This article used a combination of three marker genes targeting the coral animal host, its symbiotic alga, and the associated bacterial microbiome to characterize 60 coral colonies collected and processed in situ, during the Tara Pacific expedition.