P
Philippe Robert
Researcher at University of Oslo
Publications - 108
Citations - 1804
Philippe Robert is an academic researcher from University of Oslo. The author has contributed to research in topics: Biology & Computer science. The author has an hindex of 16, co-authored 95 publications receiving 1135 citations. Previous affiliations of Philippe Robert include Oslo University Hospital & Centre national de la recherche scientifique.
Papers
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Book ChapterDOI
How to Simulate a Germinal Center.
TL;DR: Here, it is presented in detail how to build an agent-based model (hyphasma), accounting for the dynamics of the germinal center, which encompasses the core quantitative traits of affinity maturation, and allowed to make reliable predictions in previous studies.
Posted ContentDOI
One billion synthetic 3D-antibody-antigen complexes enable unconstrained machine-learning formalized investigation of antibody specificity prediction
Philippe Robert,Rahmad Akbar,Frank R,Milena Pavlović,Michael Widrich,Igor Snapkov,Maria Chernigovskaya,Lonneke Scheffer,Andrei Slabodkin,Brij Bhushan Mehta,Vu Mh,Prósz A,Abram K,Abram K,Olar A,Enkelejda Miho,Haug Dtt,Fridtjof Lund-Johansen,Sepp Hochreiter,Ingrid Hobæk Haff,Günter Klambauer,Geir Kjetil Sandve,Greiff +22 more
TL;DR: The Absolut! as mentioned in this paper software suite enables the generation of synthetic lattice-based 3D-antibody-antigen binding structures with ground-truth access to conformational paratope, epitope, and affinity.
Journal ArticleDOI
Enquêtes de victimation et statistiques de police : les difficultés d'une comparaison
TL;DR: In this paper, les auteurs analyse les obstacles a surmonter et les difficultes a resoudre pour comparer ces deux sources, dabord en ce qui concerne plusieurs sortes d'atteintes aux biens, ensuite differentes categories de violences.
Journal ArticleDOI
IFN-γ Producing Th1 Cells Induce Different Transcriptional Profiles in Microglia and Astrocytes.
Chittappen K. Prajeeth,Oliver Dittrich-Breiholz,Steven R. Talbot,Philippe Robert,Jochen Huehn,Martin Stangel +5 more
TL;DR: It is observed that Th1-derived effectors induce distinct transcriptional changes in microglia and astrocytes in addition to commonly regulated transcripts, and this knowledge can help to better understand T cell mediated neuropathologies.
Journal ArticleDOI
The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires
Milena Pavlović,Lonneke Scheffer,Keshav Motwani,Chakravarthi Kanduri,Radmila Kompova,Nikolay Vazov,Knut Waagan,Fabian L. M. Bernal,Alexandre Almeida Costa,Brian Corrie,Rahmad Akbar,Ghadi S. Al Hajj,Gabriel Balaban,Todd M. Brusko,Maria Chernigovskaya,Scott Christley,Lindsay G. Cowell,Robert Frank,Ivar Grytten,Sveinung Gundersen,Ingrid Hobæk Haff,Eivind Hovig,Eivind Hovig,Ping-Han Hsieh,Günter Klambauer,Marieke L. Kuijjer,Marieke L. Kuijjer,Christin Lund-Andersen,Christin Lund-Andersen,Antonio Martini,Thomas Minotto,Johan Pensar,Knut Dagestad Rand,Enrico Riccardi,Philippe Robert,Artur Rocha,Andrei Slabodkin,Igor Snapkov,Ludvig M. Sollid,Ludvig M. Sollid,Dmytro Titov,Cédric R. Weber,Michael Widrich,Gur Yaari,Victor Greiff,Geir Kjetil Sandve +45 more
TL;DR: In this article, the authors present an open-source collaborative ecosystem for machine learning analysis of adaptive immune receptor repertoires (AIRR) and demonstrate the broad applicability of immuneML by reproducing a large-scale study on immune state prediction, developing, integrating and applying a novel deep learning method for antigen specificity prediction and showcasing streamlined interpretability-focused benchmarking of AIRR ML.