R
Ran Elkon
Researcher at Tel Aviv University
Publications - 94
Citations - 6968
Ran Elkon is an academic researcher from Tel Aviv University. The author has contributed to research in topics: Gene & Regulation of gene expression. The author has an hindex of 37, co-authored 81 publications receiving 5905 citations. Previous affiliations of Ran Elkon include Weizmann Institute of Science & Netherlands Cancer Institute.
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Alternative cleavage and polyadenylation: extent, regulation and function
TL;DR: The current understanding of the polyadenylation process and the latest progress in the identification of APA events, mechanisms that regulate poly(A) site selection, and biological processes and diseases resulting from APA are reviewed.
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eRNAs are required for p53-dependent enhancer activity and gene transcription
Carlos A. Melo,Carlos A. Melo,Jarno Drost,Patrick J. Wijchers,Harmen J.G. van de Werken,Elzo de Wit,Joachim A.F. Oude Vrielink,Ran Elkon,Sonia A. Melo,Nicolas Léveillé,Raghu Kalluri,Raghu Kalluri,Wouter de Laat,Reuven Agami +13 more
TL;DR: This work ascribes transcription enhancement activity to p53 with the capacity to regulate multiple genes from a single genomic binding site and produces enhancer RNAs that are required for efficient transcriptional enhancement of interacting target genes and induction of a p53-dependent cell-cycle arrest.
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A Pumilio-induced RNA structure switch in p27-3′ UTR controls miR-221 and miR-222 accessibility
Martijn Kedde,Marieke van Kouwenhove,Wilbert Zwart,Joachim A.F. Oude Vrielink,Ran Elkon,Reuven Agami,Reuven Agami +6 more
TL;DR: This work has uncovered a novel RBP-induced structural switch modulating microRNA-mediated gene expression regulation in quiescent cells, and induces a local change in RNA structure that favours association with miR-221 andMiR-222, efficient suppression of p27 expression, and rapid entry to the cell cycle.
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Functional genetic screens for enhancer elements in the human genome using CRISPR-Cas9
Gozde Korkmaz,Rui Lopes,Alejandro Pineiro Ugalde,Ekaterina Nevedomskaya,Ruiqi Han,Ksenia Myacheva,Wilbert Zwart,Ran Elkon,Reuven Agami,Reuven Agami +9 more
TL;DR: The approach expands the utility of CRISPR-Cas9 to elucidate the functions of the noncoding genome by identifying several functional enhancer elements and characterized the role of two of them in mediating p53 (TP53) and ERα (ESR1) gene regulation.
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EXPANDER – an integrative program suite for microarray data analysis
Ron Shamir,Adi Maron-Katz,Amos Tanay,Chaim Linhart,Israel Steinfeld,Roded Sharan,Yosef Shiloh,Ran Elkon +7 more
TL;DR: Expander 2.0 as mentioned in this paper is an integrative package for the analysis of gene expression data, designed as a 'one-stop shop' tool that implements various data analysis algorithms ranging from the initial steps of normalization and filtering, through clustering and biclustering, to high-level functional enrichment analysis that points to biological processes that are active in the examined conditions, and to promoter cis-regulatory elements analysis that elucidates transcription factors that control the observed transcriptional response.