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Ryan T. Davis
Researcher at University of California, Irvine
Publications - 9
Citations - 817
Ryan T. Davis is an academic researcher from University of California, Irvine. The author has contributed to research in topics: Medicine & Biology. The author has an hindex of 5, co-authored 6 publications receiving 467 citations.
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Journal ArticleDOI
Tumour heterogeneity and metastasis at single-cell resolution.
TL;DR: Recent advances in single-cell technologies are reviewed and discussed in detail how they can be leveraged to understand tumour heterogeneity and metastasis.
Journal ArticleDOI
Profiling human breast epithelial cells using single cell RNA sequencing identifies cell diversity
Quy H. Nguyen,Nicholas Pervolarakis,Kerrigan Blake,Dennis Ma,Ryan T. Davis,Nathan James,Anh T. Phung,Elizabeth Willey,Raj Kumar,Eric Jabart,Ian Driver,Jason R. Rock,Andrei Goga,Seema A. Khan,Devon A. Lawson,Zena Werb,Kai Kessenbrock +16 more
TL;DR: A comprehensive cell atlas provides insights into the cellular blueprint of the human breast epithelium and will form the foundation to understand how the system goes awry during breast cancer.
Journal ArticleDOI
Transcriptional diversity and bioenergetic shift in human breast cancer metastasis revealed by single-cell RNA sequencing.
Ryan T. Davis,Kerrigan Blake,Dennis Ma,Mari B. Ishak Gabra,Grace A. Hernandez,Anh T. Phung,Ying Yang,Dustin Maurer,Austin E. Y. T. Lefebvre,Hamad Alshetaiwi,Zhengtao Xiao,Juan Liu,Jason W. Locasale,Michelle A. Digman,Eric Mjolsness,Mei Kong,Zena Werb,Devon A. Lawson +17 more
TL;DR: Heterogeneous and distinct transcriptome programs in breast cancer micrometastasis associated with upregulated mitochondrial oxidative phosphorylation are demonstrated.
Journal ArticleDOI
An in vitro vascularized micro-tumor model of human colorectal cancer recapitulates in vivo responses to standard-of-care therapy
Stephanie J. Hachey,Silva Movsesyan,Quy H. Nguyen,Giselle Burton-Sojo,Ani Tankazyan,Jie Wu,Tuyen Hoang,Da Zhao,Shuxiong Wang,Michaela M.S. Hatch,Elizabeth Celaya,Samantha Gomez,George Chen,Ryan T. Davis,Kevin Nee,Nicholas Pervolarakis,Devon A. Lawson,Kai Kessenbrock,Abraham P. Lee,John Lowengrub,Marian L. Waterman,Christopher C.W. Hughes +21 more
TL;DR: The vascularized micro-tumor (VMT) as mentioned in this paper is a three-dimensional model system that recapitulates the complex human tumor microenvironment, including perfused vasculature, within a transparent microfluidic device, allowing real-time study of drug responses and tumor-stromal interactions.
Journal ArticleDOI
The polyadenylation code: a unified model for the regulation of mRNA alternative polyadenylation.
Ryan T. Davis,Yongsheng Shi +1 more
TL;DR: This work attempts to integrate all the known mechanisms for APA regulation into a unified model, which not only explains most of previous results, but also provides testable predictions that will improve the understanding of the mechanistic details of APAregulation.